RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ARHGEF15O94989 841 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 NADKO95544 446 aaPredicted RBP17.09■□□□□ 0.33
XRCC3-218ENST00000557439 C8AP07357 584 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 TRPC1P48995 793 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 MC1RQ01726 317 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 SYT16Q17RD7 645 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 IQCCQ4KMZ1 466 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 PAGE2BQ5JRK9 111 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 CDKL4Q5MAI5 379 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 PLEKHS1Q5SXH7 462 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 MPP7Q5T2T1 576 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 GPR155Q7Z3F1 870 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 TSEN54Q7Z6J9 526 aaKnown RBP17.09■□□□□ 0.33
XRCC3-218ENST00000557439 RASGEF1AQ8N9B8 481 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 REEP1Q9H902 201 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 CCDC88CQ9P219 2028 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 GNG14A0A1W2PPG7 69 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 RRM2P31350 389 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 RPS13P62277 151 aaKnown RBP17.09■□□□□ 0.33
XRCC3-218ENST00000557439 SRSF11Q05519 484 aaKnown RBP17.09■□□□□ 0.33
XRCC3-218ENST00000557439 RGS21Q2M5E4 152 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 SYTL3Q4VX76 610 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 CATSPEREQ5SY80 951 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 EIF3MQ7L2H7 374 aaKnown RBP17.09■□□□□ 0.33
XRCC3-218ENST00000557439 HUS1BQ8NHY5 278 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 CHPT1Q8WUD6 406 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 APH1BQ8WW43 257 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 ASZ1Q8WWH4 475 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 DNASE1L2Q92874 299 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 GABARAPL1Q9H0R8 117 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 RUBCNLQ9H714 662 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 RLIMQ9NVW2 624 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 SPATA6Q9NWH7 488 aaPredicted RBP17.09■□□□□ 0.33
XRCC3-218ENST00000557439 NDRG4Q9ULP0 352 aaKnown RBP17.09■□□□□ 0.33
XRCC3-218ENST00000557439 PCDHB11Q9Y5F2 797 aa17.09■□□□□ 0.33
XRCC3-218ENST00000557439 HELZP42694 1942 aaKnown RBP17.09■□□□□ 0.33
XRCC3-218ENST00000557439 PCM1Q15154 2024 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 TMEM247A6NEH6 219 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 M0R3G1 203 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 SCAMP2O15127 329 aaKnown RBP17.08■□□□□ 0.33
XRCC3-218ENST00000557439 GABARAPO95166 117 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 PABPC1P11940 636 aaKnown RBP17.08■□□□□ 0.33
XRCC3-218ENST00000557439 ZNF12P17014 697 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 METAP1P53582 386 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 PTPN5P54829 565 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 KCNJ10P78508 379 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 TMPRSS11BQ86T26 416 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 RAVER1Q8IY67 606 aaKnown RBP17.08■□□□□ 0.33
XRCC3-218ENST00000557439 SYNPOQ8N3V7 929 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 SETD9Q8NE22 299 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 SPPL2AQ8TCT8 520 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 ZNF566Q969W8 418 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 C7orf34Q96L11 122 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 PKP4Q99569 1192 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 RPS6KA6Q9UK32 745 aa17.08■□□□□ 0.33
XRCC3-218ENST00000557439 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.08■□□□□ 0.33
XRCC3-218ENST00000557439 EXO1Q9UQ84 846 aaKnown RBP17.08■□□□□ 0.33
XRCC3-218ENST00000557439 M0QX08 132 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 GRM6O15303 877 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 CBFA2T3O75081 653 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 CTSLP07711 333 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 CTSAP10619 480 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 ETFAP13804 333 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 IMPA1P29218 277 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 C21orf33P30042 268 aaPredicted RBP17.08■□□□□ 0.32
XRCC3-218ENST00000557439 DGKEP52429 567 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 NUDT6P53370 316 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 AP1S2P56377 157 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 GSTM4Q03013 218 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 IL18R1Q13478 541 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 PRSS36Q5K4E3 855 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 CPTPQ5TA50 214 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 ADIPOR2Q86V24 386 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 P2RY8Q86VZ1 359 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 ENTHD1Q8IYW4 607 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 OR7G3Q8NG95 312 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 OR8J2Q8NGG1 315 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 OR5AK3PQ8NH89 298 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 NEIL2Q969S2 332 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 YIPF6Q96EC8 236 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 NRTNQ99748 197 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 CPEB1Q9BZB8 566 aaKnown RBP17.08■□□□□ 0.32
XRCC3-218ENST00000557439 ACOT13Q9NPJ3 140 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 GPATCH2Q9NW75 528 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 KLHL42Q9P2K6 505 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 TPRKBQ9Y3C4 175 aa17.08■□□□□ 0.32
XRCC3-218ENST00000557439 CLDN25C9JDP6 229 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 ACVR2AP27037 513 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 CRATP43155 626 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 BCAP31P51572 246 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 RELAQ04206 551 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 NPRL3Q12980 569 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 CAMK2GQ13555 558 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-218ENST00000557439 KIAA1614Q5VZ46 1190 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 DDX53Q86TM3 631 aaKnown RBP17.07■□□□□ 0.32
XRCC3-218ENST00000557439 FAM124AQ86V42 546 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 PROX1Q92786 737 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 CIDECQ96AQ7 238 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-218ENST00000557439 FCRL1Q96LA6 429 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 ZNF347Q96SE7 839 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms