RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SSMEM1Q8WWF3 244 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 EVI5LQ96CN4 794 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 PAFAH2Q99487 392 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 FAM49AQ9H0Q0 323 aaPredicted RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 Q9N2K0 584 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 GKN1Q9NS71 199 aa3.35□□□□□ -1.87
VRK1-207ENST00000557352 SUCLA2Q9P2R7 463 aaPredicted RBP3.35□□□□□ -1.87
VRK1-207ENST00000557352 MYH3P11055 1940 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 ACOD1A6NK06 481 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 HTATSF1O43719 755 aaKnown RBP3.34□□□□□ -1.87
VRK1-207ENST00000557352 SMIM18P0DKX4 95 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 TRIM21P19474 475 aaKnown RBP3.34□□□□□ -1.87
VRK1-207ENST00000557352 LBX1P52954 281 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 MAT1AQ00266 395 aaKnown RBP3.34□□□□□ -1.87
VRK1-207ENST00000557352 ZNF74Q16587 644 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 RNASEH2BQ5TBB1 312 aaKnown RBP3.34□□□□□ -1.87
VRK1-207ENST00000557352 CES4AQ5XG92 561 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 MAATS1Q7Z4T9 603 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 TMPRSS11BQ86T26 416 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 ABHD12Q8N2K0 398 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 EXD1Q8NHP7 514 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 PDLIM5Q96HC4 596 aaKnown RBP3.34□□□□□ -1.87
VRK1-207ENST00000557352 KIFC3Q9BVG8 833 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 UBA5Q9GZZ9 404 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 OSGEPL1Q9H4B0 414 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 TRPV4Q9HBA0 871 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 PSD3Q9NYI0 1048 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 WBP11Q9Y2W2 641 aaKnown RBP3.34□□□□□ -1.87
VRK1-207ENST00000557352 MAPK8IP3Q9UPT6 1336 aa3.34□□□□□ -1.87
VRK1-207ENST00000557352 C5P01031 1676 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 TOGARAM1Q9Y4F4 1720 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 AFDNP55196 1824 aaKnown RBP3.33□□□□□ -1.88
VRK1-207ENST00000557352 AK9Q5TCS8 1911 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 LOC105371242A0A075B767 164 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 KLLNB2CW77 178 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 CTDSP2O14595 271 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 AP3D1O14617 1153 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 ZNF853P0CG23 659 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 THEGLP0DJG4 465 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 TNNT2P45379 298 aaPredicted RBP3.33□□□□□ -1.88
VRK1-207ENST00000557352 XGP55808 180 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 ZFP36L1Q07352 338 aaKnown RBP3.33□□□□□ -1.88
VRK1-207ENST00000557352 UGT3A2Q3SY77 523 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 FAM20AQ96MK3 541 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 MS4A10Q96PG2 267 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 SPAG5Q96R06 1193 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 ZNF510Q9Y2H8 683 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 CEMIPQ8WUJ3 1361 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 KIAA0232Q92628 1395 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 GLI3P10071 1580 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 ANKRD36CQ5JPF3 1778 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 TAF1LQ8IZX4 1826 aa3.33□□□□□ -1.88
VRK1-207ENST00000557352 MEIS2O14770 477 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 ADAMDEC1O15204 470 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 BCL10O95999 233 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 TNFAIP3P21580 790 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 IL4RP24394 825 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 PRKAR2BP31323 418 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 C15orf32Q32M92 178 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 IGSF11Q5DX21 431 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 PLEKHS1Q5SXH7 462 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 SEL1L3Q68CR1 1132 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 C11orf63Q6NUN7 778 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 GDPGP1Q6ZNW5 385 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 KBTBD6Q86V97 674 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 MARCH9Q86YJ5 346 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 METTL4Q8N3J2 472 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.32□□□□□ -1.88
VRK1-207ENST00000557352 CHPT1Q8WUD6 406 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 PTPMT1Q8WUK0 201 aaPredicted RBP3.32□□□□□ -1.88
VRK1-207ENST00000557352 SKA1Q96BD8 255 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 ATXN7L3BQ96GX2 97 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 MAK16Q9BXY0 300 aaKnown RBP3.32□□□□□ -1.88
VRK1-207ENST00000557352 WNT5BQ9H1J7 359 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 B3GAT2Q9NPZ5 323 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 C19orf25Q9UFG5 118 aaPredicted RBP3.32□□□□□ -1.88
VRK1-207ENST00000557352 MAP3K5Q99683 1374 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 IBTKQ9P2D0 1353 aaPredicted RBP3.32□□□□□ -1.88
VRK1-207ENST00000557352 CRB1P82279 1406 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 RREB1Q92766 1687 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 NUP188Q5SRE5 1749 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 DOT1LQ8TEK3 1739 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 CASZ1Q86V15 1759 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 ARFGEF2Q9Y6D5 1785 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 NUP98P52948 1817 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 TUBGCP6Q96RT7 1819 aa3.32□□□□□ -1.88
VRK1-207ENST00000557352 PRRC2AP48634 2157 aaKnown RBP3.32□□□□□ -1.88
VRK1-207ENST00000557352 RGPD3A6NKT7 1758 aaPredicted RBP3.31□□□□□ -1.88
VRK1-207ENST00000557352 RGPD4Q7Z3J3 1758 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 COL5A3P25940 1745 aaPredicted RBP3.31□□□□□ -1.88
VRK1-207ENST00000557352 THSD7AQ9UPZ6 1657 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 PXDNLA1KZ92 1463 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 ITIH6Q6UXX5 1313 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 FANCIQ9NVI1 1328 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 SHISA7A6NL88 538 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 A8MXK9 166 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 SNURFLB1AK76 121 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 H0YAE9 185 aa3.31□□□□□ -1.88
VRK1-207ENST00000557352 TOMM70O94826 608 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms