RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MBOAT1Q6ZNC8 495 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 MAMDC2Q7Z304 686 aaPredicted RBP13.43□□□□□ -0.26
SNX6-210ENST00000557341 VN1R4Q7Z5H5 301 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 C17orf64Q86WR6 236 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 CNTN4Q8IWV2 1026 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 SIRT6Q8N6T7 355 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 OR9A4Q8NGU2 314 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 THAP11Q96EK4 314 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 LINGO1Q96FE5 620 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 PARVBQ9HBI1 364 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 KCNE1BA0A087WTH5 132 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 WIPF3A6NGB9 483 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 BMP10O95393 424 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 HIST1H2AGP0C0S8 130 aaPredicted RBP13.42□□□□□ -0.26
SNX6-210ENST00000557341 TCP1P17987 556 aaKnown RBP13.42□□□□□ -0.26
SNX6-210ENST00000557341 HIST1H2ADP20671 130 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 GRK3P35626 688 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 CDKN2DP55273 166 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 CSNK1G2P78368 415 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 TIAL1Q01085 375 aaKnown RBP eCLIP13.42□□□□□ -0.26
SNX6-210ENST00000557341 PDAP1Q13442 181 aaKnown RBP13.42□□□□□ -0.26
SNX6-210ENST00000557341 PCOLCEQ15113 449 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 INAQ16352 499 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 BBS9Q3SYG4 887 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 MFSD4BQ5TF39 518 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 TMEM214Q6NUQ4 689 aaKnown RBP13.42□□□□□ -0.26
SNX6-210ENST00000557341 RPUSD3Q6P087 351 aaKnown RBP13.42□□□□□ -0.26
SNX6-210ENST00000557341 PAQR3Q6TCH7 311 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 TMEM205Q6UW68 189 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 LCTLQ6UWM7 567 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 GALNT7Q86SF2 657 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 CAMKVQ8NCB2 501 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 FAR1Q8WVX9 515 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 METTL21AQ8WXB1 218 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 PSMF1Q92530 271 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 HIST1H2AHQ96KK5 128 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 HIST1H2AJQ99878 128 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 H2AFJQ9BTM1 129 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 FAM129AQ9BZQ8 928 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 ZNF700Q9H0M5 742 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 ATG10Q9H0Y0 220 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 PPANQ9NQ55 473 aaKnown RBP13.42□□□□□ -0.26
SNX6-210ENST00000557341 CORO1CQ9ULV4 474 aaPredicted RBP13.42□□□□□ -0.26
SNX6-210ENST00000557341 SH2B3Q9UQQ2 575 aa13.42□□□□□ -0.26
SNX6-210ENST00000557341 CACNA1DQ01668 2161 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 TRAV17A0A0B4J275 112 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 WFS1O76024 890 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 CELA2AP08217 269 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 SLC35G6P0C7Q6 338 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 ICAM2P13598 275 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 IL1RNP18510 177 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 GABRB3P28472 473 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 TNFSF10P50591 281 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 EFNA3P52797 238 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 IL2P60568 153 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 SNRPNP63162 240 aaKnown RBP13.41□□□□□ -0.26
SNX6-210ENST00000557341 NAE1Q13564 534 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 MORF4L2Q15014 288 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 PHKG1Q16816 387 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 MINDY4Q4G0A6 757 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 MSS51Q4VC12 460 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 PRSS41Q7RTY9 318 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 ASPGQ86U10 573 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 PDIK1LQ8N165 341 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 BCORP1Q8N888 145 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 CATSPER1Q8NEC5 780 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 OR1N1Q8NGS0 311 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 ZCCHC10Q8TBK6 192 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 ALKBH8Q96BT7 664 aaKnown RBP13.41□□□□□ -0.26
SNX6-210ENST00000557341 MAGEB10Q96LZ2 347 aaPredicted RBP13.41□□□□□ -0.26
SNX6-210ENST00000557341 HAUS8Q9BT25 410 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 TUBB6Q9BUF5 446 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 SGPP1Q9BX95 441 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 VN1R1Q9GZP7 353 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 ANKHQ9HCJ1 492 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 OLAHQ9NV23 265 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 ARL15Q9NXU5 204 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 HCN3Q9P1Z3 774 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 SLC17A6Q9P2U8 582 aa13.41□□□□□ -0.26
SNX6-210ENST00000557341 C19orf25Q9UFG5 118 aaPredicted RBP13.41□□□□□ -0.26
SNX6-210ENST00000557341 FEZF1A0PJY2 475 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 JRKO75564 520 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 TSPAN12O95859 305 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 AHSGP02765 367 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 ITGAMP11215 1152 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 CDH1P12830 882 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 BCL6P41182 706 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 XCR1P46094 333 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 AP1S2P56377 157 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 PER3P56645 1201 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 CAPN13Q6MZZ7 669 aaPredicted RBP13.4□□□□□ -0.26
SNX6-210ENST00000557341 FAM45BPQ6NSW5 357 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 HIBCHQ6NVY1 386 aaPredicted RBP13.4□□□□□ -0.26
SNX6-210ENST00000557341 GPATCH11Q8N954 259 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 OR51Q1Q8NH59 317 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 FAM45AQ8TCE6 357 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 HAS2Q92819 552 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 TM4SF19Q96DZ7 209 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 CFAP36Q96G28 342 aa13.4□□□□□ -0.26
SNX6-210ENST00000557341 RUNDC3BQ96NL0 473 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms