RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 KIF2BQ8N4N8 673 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 HORMAD2Q8N7B1 307 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 OR9A1PQ8NGU1 263 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 C16orf52Q8NHV5 167 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 SMPDL3AQ92484 453 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 ARSGQ96EG1 525 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 CCDC138Q96M89 665 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 ALS2CR12Q96Q35 445 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 FERMT1Q9BQL6 677 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 OSBPL8Q9BZF1 889 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 C19orf25Q9UFG5 118 aaPredicted RBP11.78□□□□□ -0.52
PSEN1-221ENST00000557293 PCYOX1Q9UHG3 505 aa11.78□□□□□ -0.52
PSEN1-221ENST00000557293 FN1P02751 2386 aaKnown RBP11.78□□□□□ -0.52
PSEN1-221ENST00000557293 PHF3Q92576 2039 aaKnown RBP11.77□□□□□ -0.52
PSEN1-221ENST00000557293 KIAA1324LA8MWY0 1029 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-221ENST00000557293 CDK2AP1O14519 115 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 TXNDC9O14530 226 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 PRMT5O14744 637 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-221ENST00000557293 NDC80O14777 642 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 HAT1O14929 419 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 HS6ST1O60243 411 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 ZWINTO95229 277 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 TPP2P29144 1249 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-221ENST00000557293 TRHRP34981 398 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-221ENST00000557293 CCNFP41002 786 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 BCL6P41182 706 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 AVPR1BP47901 424 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 AGTR2P50052 363 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 MEOX1P50221 254 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 GDF10P55107 478 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 MLF1P58340 268 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 SLC26A5P58743 744 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 PTK6Q13882 451 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 NAA25Q14CX7 972 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 MINDY4Q4G0A6 757 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 CCDC181Q5TID7 509 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 ICE2Q659A1 982 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 LIX1LQ8IVB5 337 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 SULF2Q8IWU5 870 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 SLC5A8Q8N695 610 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 FAM71DQ8N9W8 422 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 OR52N2Q8NGI0 321 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 TTC1Q99614 292 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 MACROD1Q9BQ69 325 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 TSSK1BQ9BXA7 367 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 POLDIP3Q9BY77 421 aaKnown RBP11.77□□□□□ -0.53
PSEN1-221ENST00000557293 TP63Q9H3D4 680 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-221ENST00000557293 LANCL2Q9NS86 450 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 HCN3Q9P1Z3 774 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 TFR2Q9UP52 801 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 PLEKHA6Q9Y2H5 1048 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 SCN3AQ9NY46 2000 aa11.77□□□□□ -0.53
PSEN1-221ENST00000557293 FAM237BA0A1B0GVD1 139 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 FEZF1A0PJY2 475 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 ARHGEF33A8MVX0 844 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 PSMD3O43242 534 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 DNAJB6O75190 326 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 EZRP15311 586 aaKnown RBP11.76□□□□□ -0.53
PSEN1-221ENST00000557293 PTPN7P35236 360 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 HLCSP50747 726 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 SNTB1Q13884 538 aaKnown RBP11.76□□□□□ -0.53
PSEN1-221ENST00000557293 TMED2Q15363 201 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 NDUFA9Q16795 377 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 FASTKD1Q53R41 847 aaKnown RBP11.76□□□□□ -0.53
PSEN1-221ENST00000557293 MFSD4BQ5TF39 518 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 TMEM198Q66K66 360 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 BIVMQ86UB2 503 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 PDSS2Q86YH6 399 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 SPNS2Q8IVW8 549 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 LRRC56Q8IYG6 542 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-221ENST00000557293 ARMC10Q8N2F6 343 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 RAB42Q8N4Z0 105 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 POGLUT1Q8NBL1 392 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 WFDC11Q8NEX6 87 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 OR6P1Q8NGX9 317 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 TSLPQ969D9 159 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 MBD6Q96DN6 1003 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 CCDC42Q96M95 316 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 ALPK1Q96QP1 1244 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 PKP4Q99569 1192 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 GPATCH1Q9BRR8 931 aaKnown RBP11.76□□□□□ -0.53
PSEN1-221ENST00000557293 RASSF1Q9NS23 344 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 GALPQ9UBC7 116 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 TAC3Q9UHF0 121 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 PCDHA3Q9Y5H8 950 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 MRFAP1Q9Y605 127 aa11.76□□□□□ -0.53
PSEN1-221ENST00000557293 ZNF407Q9C0G0 2248 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 E7ENX8 843 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 SGK494L7N484 410 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 MYO1CO00159 1063 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 PEX1O43933 1283 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 PDE9AO76083 593 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 PKMP14618 531 aaKnown RBP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 IL1RNP18510 177 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 RPS3P23396 243 aaKnown RBP eCLIP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 ADRA1DP25100 572 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 CTNNA2P26232 953 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 CTNNA1P35221 906 aaKnown RBP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 RPA3P35244 121 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 CYB561P49447 251 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms