RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 UBTD1Q9HAC8 227 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 UGT1A7Q9HAW7 530 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 UGT1A10Q9HAW8 530 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 UGT1A8Q9HAW9 530 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 IL26Q9NPH9 171 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ZNF701Q9NV72 531 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-245ENST00000556958 SPHK1Q9NYA1 384 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ADAM22Q9P0K1 906 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ZC3H7BQ9UGR2 993 aaKnown RBP5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ICKQ9UPZ9 632 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ZNF711Q9Y462 761 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 PCDHGB3Q9Y5G1 929 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 FAM169AQ9Y6X4 670 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 CHD3Q12873 2000 aaKnown RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 A0A1B0GVC2 190 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 TARM1B6A8C7 271 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 AQP7O14520 342 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 GAPDHSO14556 408 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 SUSD5O60279 629 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 RNF8O76064 485 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 ALX3O95076 343 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 FKBP9O95302 570 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 SMC2O95347 1197 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 CALB1P05937 261 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 MMEP08473 750 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 ERVK-10P10266 1014 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 PON1P27169 355 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 TRHRP34981 398 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 HMGCLP35914 325 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 GRIA3P42263 894 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 NSFP46459 744 aaKnown RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 ST13P50502 369 aaKnown RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 ITGA8P53708 1063 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 GSCP56915 257 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 KRT85P78386 507 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 OCRLQ01968 901 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 CUL4AQ13619 759 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 BOP1Q14137 746 aaKnown RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 TRIM14Q14142 442 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 IHHQ14623 411 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 SF3B4Q15427 424 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 CA9Q16790 459 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 C6orf52Q5T4I8 152 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 DET1Q7L5Y6 550 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 TBC1D21Q8IYX1 336 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 RELL2Q8NC24 303 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 SLC30A5Q8TAD4 765 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 MMABQ96EY8 250 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 TRMT61AQ96FX7 289 aaKnown RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 DCUN1D1Q96GG9 259 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 LPAR4Q99677 370 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 NPAS2Q99743 824 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 LDAHQ9H6V9 325 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 ZDHHC11Q9H8X9 412 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 VPS37BQ9H9H4 285 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 BPIFA1Q9NP55 256 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 CWC15Q9P013 229 aaKnown RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 ARMCX1Q9P291 453 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 RCOR1Q9UKL0 485 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 HPSEQ9Y251 543 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 DUSP10Q9Y6W6 482 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.36□□□□□ -1.55
ATXN3-245ENST00000556958 SPTBP11277 2137 aa5.36□□□□□ -1.55
ATXN3-245ENST00000556958 IGHV3-20A0A0C4DH32 117 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 GLYATL1P3A0A0U1RQE8 302 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 AHRRA9YTQ3 701 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 MATN4O95460 622 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 B3GALT4O96024 378 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 IGHG3P01860 377 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 EIF2S1P05198 315 aaKnown RBP5.35□□□□□ -1.55
ATXN3-245ENST00000556958 PIRTP0C851 137 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 PNMA6AP0CW24 399 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-245ENST00000556958 CCNCP24863 283 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 CEACAM8P31997 349 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-245ENST00000556958 OPRM1P35372 400 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 TIMP3P35625 211 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 SLC26A3P40879 764 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 MAN2A2P49641 1150 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 SRSF2Q01130 221 aaKnown RBP5.35□□□□□ -1.55
ATXN3-245ENST00000556958 NIPAL4Q0D2K0 466 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 FOXO1Q12778 655 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 BECN1Q14457 450 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 SLC10A1Q14973 349 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 SIX1Q15475 284 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-245ENST00000556958 FAM174BQ3ZCQ3 159 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 MIDNQ504T8 468 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 PRR31Q5SQ13 230 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 NDUFAF5Q5TEU4 345 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 MFSD4BQ5TF39 518 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 KCTD11Q693B1 232 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 OGFOD2Q6N063 350 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 DNAJC24Q6P3W2 148 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 TRILQ7L0X0 811 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 DAAM2Q86T65 1068 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 NOP9Q86U38 636 aaKnown RBP5.35□□□□□ -1.55
ATXN3-245ENST00000556958 NT5DC3Q86UY8 548 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATXN3-245ENST00000556958 SHISA5Q8N114 240 aa5.35□□□□□ -1.55
ATXN3-245ENST00000556958 FBXW8Q8N3Y1 598 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms