RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 NDUFA9Q16795 377 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 ANKRD20A4Q4UJ75 823 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 CTSL3PQ5NE16 218 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 PRSS41Q7RTY9 318 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 ADCK2Q7Z695 626 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 ANKRD37Q7Z713 158 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 SLC5A8Q8N695 610 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 FAM98AQ8NCA5 519 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 PPFIBP2Q8ND30 876 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 PPHLN1Q8NEY8 458 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 OR51Q1Q8NH59 317 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 NRGNQ92686 78 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 PEX13Q92968 403 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 MMP25Q9NPA2 562 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 ABCF3Q9NUQ8 709 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 UTP6Q9NYH9 597 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 COQ3Q9NZJ6 369 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 HCN3Q9P1Z3 774 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 LRFN1Q9P244 771 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 ASB1Q9Y576 335 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 MYO1CO00159 1063 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 SMAPO00193 183 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 HAT1O14929 419 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 NIPSNAP2O75323 286 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 SLC25A12O75746 678 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 CCNDBP1O95273 360 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 NSA2O95478 260 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 IFNB1P01574 187 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 CYC1P08574 325 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 CD99P14209 185 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 IGFBP2P18065 325 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 IL1RNP18510 177 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 FMO4P31512 558 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 PTGER1P34995 402 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 AGTR2P50052 363 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 PNLIPRP1P54315 467 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 CRADDP78560 199 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 RELAQ04206 551 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 TBX2Q13207 712 aaPredicted RBP8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 PTK6Q13882 451 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 ARHGAP19Q14CB8 494 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 EXT1Q16394 746 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 SFT2D3Q587I9 215 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 ACSBG2Q5FVE4 666 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 ZNF468Q5VIY5 522 aaPredicted RBP8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 SLC25A25Q6KCM7 469 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 PAPD4Q6PIY7 484 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 PRUNE1Q86TP1 453 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 TMEM200AQ86VY9 491 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 LRRC6Q86X45 466 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 EID3Q8N140 333 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 MPP5Q8N3R9 675 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 CPSF7Q8N684 471 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 HORMAD2Q8N7B1 307 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 TC2NQ8N9U0 490 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 M1APQ8TC57 530 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 ATG4AQ8WYN0 398 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 BIRC8Q96P09 236 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 PKP4Q99569 1192 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 MACROD1Q9BQ69 325 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 RAB6BQ9NRW1 208 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 TREX1Q9NSU2 369 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 SCN3AQ9NY46 2000 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 TNFRSF10DQ9UBN6 386 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 DNAJC13O75165 2243 aa8.5□□□□□ -1.05
HNRNPC-227ENST00000556897 A0A1B0GTH9 108 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 GRID2IPA4D2P6 1211 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 NKX2-6A6NCS4 301 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 FAM90A27PA6NNH2 459 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 E7ENX8 843 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 H7BY64 318 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 SGK494L7N484 410 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 NME2P1O60361 137 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 PSIP1O75475 530 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 CDC123O75794 336 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 SLC16A8O95907 504 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 TPOP07202 933 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 APRTP07741 180 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 NME2P22392 152 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 ATP5DP30049 168 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 DNAJA1P31689 397 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 HSD17B2P37059 387 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 FDFT1P37268 417 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 BCL6P41182 706 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 SESN2P58004 480 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 TAP2Q03519 686 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 ACTN3Q08043 901 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 GBX1Q14549 363 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 ABRAXAS2Q15018 415 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 NSDHLQ15738 373 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 KLHL38Q2WGJ6 581 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 PCID2Q5JVF3 399 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 CEP128Q6ZU80 1094 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 VN1R4Q7Z5H5 301 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 CD163Q86VB7 1156 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 CCDC170Q8IYT3 715 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 MMP21Q8N119 569 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 MARVELD2Q8N4S9 558 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 OTUD6BQ8N6M0 293 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms