RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 PKNOX1P55347 436 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 ABCE1P61221 599 aaKnown RBP16.66■□□□□ 0.26
TUBB3-211ENST00000556536 RELAQ04206 551 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 STX3Q13277 289 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 RBBP5Q15291 538 aaKnown RBP16.66■□□□□ 0.26
TUBB3-211ENST00000556536 TMTC4Q5T4D3 741 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 ADNP2Q6IQ32 1131 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 CUZD1Q86UP6 607 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 OR4N4Q8N0Y3 316 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 CACTIN-AS1Q8N1I8 211 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 ANKRD53Q8N9V6 530 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 FAM76AQ8TAV0 307 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 DYDC1Q8WWB3 177 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 CKAP2Q8WWK9 683 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 ZNF75CPQ92670 426 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-211ENST00000556536 LIN37Q96GY3 246 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-211ENST00000556536 OR2A5Q96R48 311 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 KCNA7Q96RP8 456 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 ZFYVE21Q9BQ24 234 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 TRMOQ9BU70 441 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 MANSC1Q9H8J5 431 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 LHX6Q9UPM6 363 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 LOXL2Q9Y4K0 774 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 UNC13CQ8NB66 2214 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 MAP3K7O43318 606 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 UGDHO60701 494 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 ESRRBO95718 433 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 STATHP02808 62 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 HGFP14210 728 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 CXCR2P25025 360 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 GRK3P35626 688 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 SERPINB5P36952 375 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 HNF4AP41235 474 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 SLC1A6P48664 564 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 FOXA1P55317 472 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 RPS15AP62244 130 aaKnown RBP16.65■□□□□ 0.26
TUBB3-211ENST00000556536 LAPTM5Q13571 262 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 CPSF6Q16630 551 aaKnown RBP eCLIP16.65■□□□□ 0.26
TUBB3-211ENST00000556536 ZC3H12BQ5HYM0 836 aaKnown RBP16.65■□□□□ 0.26
TUBB3-211ENST00000556536 PAGE2BQ5JRK9 111 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 TMIGD1Q6UXZ0 262 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 TMPRSS7Q7RTY8 843 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 TRIM42Q8IWZ5 723 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 KRT78Q8N1N4 520 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 CDYL2Q8N8U2 506 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 BMPERQ8N8U9 685 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 MFSD9Q8NBP5 474 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 RAB3IL1Q8TBN0 382 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 GRAMD1AQ96CP6 724 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 SARGQ9BW04 601 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 NT5DC2Q9H857 520 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 TRPS1Q9UHF7 1281 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 PLCL2Q9UPR0 1127 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 STK38LQ9Y2H1 464 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 NEUROG3Q9Y4Z2 214 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 PCDHGA4Q9Y5G9 962 aa16.65■□□□□ 0.26
TUBB3-211ENST00000556536 ITPR1Q14643 2758 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 FREM2Q5SZK8 3169 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 H0YGG7 62 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 H0YIV9 168 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 FFAR3O14843 346 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 GPR42O15529 346 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 SNNO75324 88 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 HSPA4LO95757 839 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 CAPN1P07384 714 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 ARF3P61204 181 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 CYP4F2P78329 520 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 TUBB3Q13509 450 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 ZRSR2Q15696 482 aaKnown RBP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 HIST2H2ACQ16777 129 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 GGTA1PQ4G0N0 100 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 TCHHL1Q5QJ38 904 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 HIST2H2AA3Q6FI13 130 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 MED27Q6P2C8 311 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 RAB11FIP2Q7L804 512 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 VN1R5Q7Z5H4 357 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 VN1R4Q7Z5H5 301 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 LAS2Q8IYD9 372 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 GALNT15Q8N3T1 639 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 OR7G3Q8NG95 312 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 OR1L3Q8NH93 324 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 ZNF501Q96CX3 271 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 OR6C1Q96RD1 312 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 SORT1Q99523 831 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 CMKLR1Q99788 373 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 MACROD1Q9BQ69 325 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 SPRTNQ9H040 489 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 EML4Q9HC35 981 aaKnown RBP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 FGF21Q9NSA1 209 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 AKAP7Q9P0M2 348 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-211ENST00000556536 TIMM22Q9Y584 194 aa16.64■□□□□ 0.25
TUBB3-211ENST00000556536 CCDC187A0A096LP49 1063 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 TMEM233B4DJY2 109 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 TMEM150CB9EJG8 249 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 KLF11O14901 512 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 P2RX6O15547 441 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 EIF2S1P05198 315 aaKnown RBP16.63■□□□□ 0.25
TUBB3-211ENST00000556536 MSL3P1P0C860 447 aa16.63■□□□□ 0.25
TUBB3-211ENST00000556536 PCNAP12004 261 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms