RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 GLRBP48167 497 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 PGGT1BP53609 377 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 AP1S2P56377 157 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 SNRPNP63162 240 aaKnown RBP13.1□□□□□ -0.31
PCNX4-209ENST00000555569 MAT1AQ00266 395 aaKnown RBP13.1□□□□□ -0.31
PCNX4-209ENST00000555569 EEF1A2Q05639 463 aaKnown RBP13.1□□□□□ -0.31
PCNX4-209ENST00000555569 PDIA2Q13087 525 aaKnown RBP13.1□□□□□ -0.31
PCNX4-209ENST00000555569 SYT16Q17RD7 645 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 DUPD1Q68J44 220 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 FAAH2Q6GMR7 532 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 CAPN13Q6MZZ7 669 aaPredicted RBP13.1□□□□□ -0.31
PCNX4-209ENST00000555569 ISLR2Q6UXK2 745 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 NDUFAF7Q7L592 441 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 CUZD1Q86UP6 607 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 ZC3H7AQ8IWR0 971 aaKnown RBP13.1□□□□□ -0.31
PCNX4-209ENST00000555569 CAMKVQ8NCB2 501 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 HAUS8Q9BT25 410 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 TRIM54Q9BYV2 358 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 EPS8L2Q9H6S3 715 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 ASF1BQ9NVP2 202 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 ARL15Q9NXU5 204 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 MRPS2Q9Y399 296 aaKnown RBP13.1□□□□□ -0.31
PCNX4-209ENST00000555569 PCDHGA10Q9Y5H3 936 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 CSAG2Q9Y5P2 127 aa13.1□□□□□ -0.31
PCNX4-209ENST00000555569 A0A1W2PQ72 361 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 FEZF1A0PJY2 475 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 BLACEA4D250 179 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 H0YIG0 161 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 NDC80O14777 642 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 TP73O15350 636 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 AGFG2O95081 481 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 NSA2O95478 260 aaKnown RBP13.09□□□□□ -0.31
PCNX4-209ENST00000555569 NPPBP16860 134 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 GRK3P35626 688 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 BCL6P41182 706 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 RPL21P46778 160 aaKnown RBP13.09□□□□□ -0.31
PCNX4-209ENST00000555569 MGAT5Q09328 741 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 MRPL49Q13405 166 aaKnown RBP13.09□□□□□ -0.31
PCNX4-209ENST00000555569 NR6A1Q15406 480 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 CRB2Q5IJ48 1285 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 KBTBD2Q8IY47 623 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 FBXO36Q8NEA4 188 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 OR9A4Q8NGU2 314 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 OR56A3Q8NH54 315 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 DNAJB14Q8TBM8 379 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 ATL1Q8WXF7 558 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 FBXL8Q96CD0 374 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 PDLIM5Q96HC4 596 aaKnown RBP13.09□□□□□ -0.31
PCNX4-209ENST00000555569 LMF1Q96S06 567 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 KRT12Q99456 494 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 MACROD1Q9BQ69 325 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 FAM129AQ9BZQ8 928 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 RIC8BQ9NVN3 520 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 ZFATQ9P243 1243 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 MKL2Q9ULH7 1088 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 NOVA2Q9UNW9 492 aaKnown RBP13.09□□□□□ -0.31
PCNX4-209ENST00000555569 SNX24Q9Y343 169 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 COPG1Q9Y678 874 aaKnown RBP13.09□□□□□ -0.31
PCNX4-209ENST00000555569 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
PCNX4-209ENST00000555569 CPAMD8Q8IZJ3 1885 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 POLEQ07864 2286 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 LOC102723996A0A087X1L8 192 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 IGHV1-45A0A0A0MS14 117 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 E7ESA3 106 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 FANCGO15287 622 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 LCMT2O60294 686 aaKnown RBP13.08□□□□□ -0.32
PCNX4-209ENST00000555569 KLHL18O94889 574 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 BMP10O95393 424 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 GUCA1CO95843 209 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 ENO2P09104 434 aaPredicted RBP13.08□□□□□ -0.32
PCNX4-209ENST00000555569 PRR35P0CG20 571 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 IL1RNP18510 177 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 MFAP5Q13361 173 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 FASTKD3Q14CZ7 662 aaKnown RBP13.08□□□□□ -0.32
PCNX4-209ENST00000555569 ZXDCQ2QGD7 858 aaPredicted RBP13.08□□□□□ -0.32
PCNX4-209ENST00000555569 TMEM214Q6NUQ4 689 aaKnown RBP13.08□□□□□ -0.32
PCNX4-209ENST00000555569 TMEM205Q6UW68 189 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 LINC00696Q6ZRV3 163 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 PRSS41Q7RTY9 318 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 STRA8Q7Z7C7 330 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 ASPGQ86U10 573 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 SLC26A11Q86WA9 606 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 ZC3HC1Q86WB0 502 aaKnown RBP13.08□□□□□ -0.32
PCNX4-209ENST00000555569 MFSD9Q8NBP5 474 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 ABHD11Q8NFV4 315 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 ZCCHC10Q8TBK6 192 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 SLC13A3Q8WWT9 602 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 PYCR2Q96C36 320 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 TM4SF19Q96DZ7 209 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 CNDP1Q96KN2 507 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 PSMG3-AS1Q96PY0 264 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 ANKHQ9HCJ1 492 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 MOCS1Q9NZB8 636 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 PSAT1Q9Y617 370 aa13.08□□□□□ -0.32
PCNX4-209ENST00000555569 FAM95CA0A1B0GW59 222 aa13.07□□□□□ -0.32
PCNX4-209ENST00000555569 JRKO75564 520 aa13.07□□□□□ -0.32
PCNX4-209ENST00000555569 CBX6O95503 412 aa13.07□□□□□ -0.32
PCNX4-209ENST00000555569 SERPINA7P05543 415 aa13.07□□□□□ -0.32
PCNX4-209ENST00000555569 SLC35G6P0C7Q6 338 aa13.07□□□□□ -0.32
PCNX4-209ENST00000555569 GP1BBP13224 206 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms