RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SPRED3Q2MJR0 410 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 FCRL6Q6DN72 434 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 LAIR1Q6GTX8 287 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 ZNF425Q6IV72 752 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 GUSBP11Q6P575 273 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 FIGLAQ6QHK4 219 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 RIPOR1Q6ZS17 1223 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 RNF165Q6ZSG1 346 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 FAM92BQ6ZTR7 304 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 USP53Q70EK8 1073 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 CHSY3Q70JA7 882 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 PACS2Q86VP3 889 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 TREML1Q86YW5 311 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 STON2Q8WXE9 905 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 REPS1Q96D71 796 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 CCDC106Q9BWC9 280 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 MRPL1Q9BYD6 325 aaKnown RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 OR51B5Q9H339 312 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 LRTM1Q9HBL6 345 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 RXFP3Q9NSD7 469 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 FAM86C1Q9NVL1 165 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 KLHL3Q9UH77 587 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 SNX7Q9UNH6 387 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 BTBD3Q9Y2F9 522 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 ANKDD1BA6NHY2 528 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 CAPN5O15484 640 aaPredicted RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 ZW10O43264 779 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 CTSVO60911 334 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 SNRNP200O75643 2136 aaKnown RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 CBX6O95503 412 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 EZRP15311 586 aaKnown RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 GRK3P35626 688 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 SCTRP47872 440 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 KIAA0040Q15053 153 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 NR0B2Q15466 257 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 IL23RQ5VWK5 629 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 FBXO42Q6P3S6 717 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 PAQR7Q86WK9 346 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 UBE2E3Q969T4 207 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 CCDC74AQ96AQ1 378 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 AHCYL2Q96HN2 611 aaKnown RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 PPP3R2Q96LZ3 170 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 TGM7Q96PF1 710 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 MAP3K3Q99759 626 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 ZNF385DQ9H6B1 395 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 DMRT3Q9NQL9 472 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 C1orf109Q9NX04 203 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 VPS29Q9UBQ0 182 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 POMT2Q9UKY4 750 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 POLR3HQ9Y535 204 aaPredicted RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 ASXL3Q9C0F0 2248 aa9.77□□□□□ -0.84
SRP54-208ENST00000555557 IGHV1OR21-1A0A087WYE8 117 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 A0A0J9YVX5 310 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 A0A0J9YY10 115 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 TRBC2A0A5B9 178 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 SERTM1A2A2V5 107 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 OR2A25A4D2G3 310 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 CAPN14A8MX76 684 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 C9JVG2 144 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 FOXE1O00358 373 aaPredicted RBP9.77□□□□□ -0.85
SRP54-208ENST00000555557 TNFSF14O43557 240 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 SH3BP5O60239 455 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 PCDHGA12O60330 932 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 RETP07949 1114 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 ST6GAL1P15907 406 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 CDH3P22223 829 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 ERVK-8P63133 956 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 CFHR1Q03591 330 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 SPEM2Q0P670 501 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 CSTF3Q12996 717 aaKnown RBP9.77□□□□□ -0.85
SRP54-208ENST00000555557 SLC5A12Q1EHB4 618 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 PERM1Q5SV97 790 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 OGFOD2Q6N063 350 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 KLHL35Q6PF15 583 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 PAOXQ6QHF9 649 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 GBP7Q8N8V2 638 aaPredicted RBP9.77□□□□□ -0.85
SRP54-208ENST00000555557 OR9I1Q8NGQ6 314 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 NUDT8Q8WV74 236 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 EBPLQ9BY08 206 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 RHBGQ9H310 441 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 BRF2Q9HAW0 419 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 ARL8BQ9NVJ2 186 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 TMEM9Q9P0T7 183 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 BAIAP2L1Q9UHR4 511 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 HEATR5BQ9P2D3 2071 aa9.77□□□□□ -0.85
SRP54-208ENST00000555557 LOC100653049A0A140TA62 436 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 SLC9B1P1A6NJY1 282 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 HCRTR1O43613 425 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 KRT34O76011 436 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 RSL1D1O76021 490 aaKnown RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 GBAP04062 536 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 G6PDP11413 515 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 HRH2P25021 359 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 CD1CP29017 333 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 PIK3CBP42338 1070 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 EPHA4P54764 986 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 EMX2Q04743 252 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 TBL3Q12788 808 aaKnown RBP9.76□□□□□ -0.85
SRP54-208ENST00000555557 KLF10Q13118 480 aa9.76□□□□□ -0.85
SRP54-208ENST00000555557 DGLUCYQ7Z3D6 616 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms