RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 FAM95CA0A1B0GW59 222 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 TRBC2A0A5B9 178 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 P2RX6O15547 441 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 CASQ1P31415 396 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 CCR8P51685 355 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 FOXL2P58012 376 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 SKP1P63208 163 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 POU4F1Q01851 419 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 PWP1Q13610 501 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 FASTKD3Q14CZ7 662 aaKnown RBP11.23□□□□□ -0.61
VRK1-204ENST00000555351 PPP1R3AQ16821 1122 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 ZXDCQ2QGD7 858 aaPredicted RBP11.23□□□□□ -0.61
VRK1-204ENST00000555351 VWA2Q5GFL6 755 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 CRB2Q5IJ48 1285 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 CDKL4Q5MAI5 379 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 B3GNTL1Q67FW5 361 aaPredicted RBP11.23□□□□□ -0.61
VRK1-204ENST00000555351 TMEM205Q6UW68 189 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 SHISA6Q6ZSJ9 500 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 ADAMTSL2Q86TH1 951 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 ASPGQ86U10 573 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 LAPTM4BQ86VI4 370 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 TMEM151BQ8IW70 566 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 KBTBD2Q8IY47 623 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 FAM26EQ8N5C1 309 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 DTWD1Q8N5C7 304 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 MFSD9Q8NBP5 474 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 BARD1Q99728 777 aaKnown RBP11.23□□□□□ -0.61
VRK1-204ENST00000555351 WDR77Q9BQA1 342 aaPredicted RBP11.23□□□□□ -0.61
VRK1-204ENST00000555351 RAB17Q9H0T7 212 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 ATG10Q9H0Y0 220 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 ABCF3Q9NUQ8 709 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 RIC8BQ9NVN3 520 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 SLC17A6Q9P2U8 582 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 PSAT1Q9Y617 370 aa11.23□□□□□ -0.61
VRK1-204ENST00000555351 IGHV1-45A0A0A0MS14 117 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 A0A0A6YYC8 382 aaPredicted RBP11.22□□□□□ -0.61
VRK1-204ENST00000555351 NSG1A0A0A6YYJ2 146 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 I3L1I5 382 aaPredicted RBP11.22□□□□□ -0.61
VRK1-204ENST00000555351 BMP10O95393 424 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 SERPINA7P05543 415 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 HEXBP07686 556 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 COX6A1P12074 109 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 CDH1P12830 882 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 AHRP35869 848 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 BCL6P41182 706 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 TAS2R39P59534 338 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 RAPSNQ13702 412 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 HERC3Q15034 1050 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 PLEKHN1Q494U1 663 aaPredicted RBP11.22□□□□□ -0.61
VRK1-204ENST00000555351 COLEC12Q5KU26 742 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 TMEM207Q6UWW9 146 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 ISLR2Q6UXK2 745 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 MBOAT1Q6ZNC8 495 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 PLD3Q8IV08 490 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 ZC3H7AQ8IWR0 971 aaKnown RBP11.22□□□□□ -0.61
VRK1-204ENST00000555351 KLHDC8AQ8IYD2 350 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 SLC13A3Q8WWT9 602 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 TSPAN17Q96FV3 270 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 OR4K3Q96R72 315 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 OR1F2PQ96R84 312 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 CPNE1Q99829 537 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 DERL2Q9GZP9 239 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 ZNF700Q9H0M5 742 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 EPS8L2Q9H6S3 715 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 PELI2Q9HAT8 420 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 ANKHQ9HCJ1 492 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 GRHL1Q9NZI5 618 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 UTP11Q9Y3A2 253 aaKnown RBP11.22□□□□□ -0.61
VRK1-204ENST00000555351 OARD1Q9Y530 152 aa11.22□□□□□ -0.61
VRK1-204ENST00000555351 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.22□□□□□ -0.61
VRK1-204ENST00000555351 RAD51CO43502 376 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 LCMT2O60294 686 aaKnown RBP11.21□□□□□ -0.61
VRK1-204ENST00000555351 ALOX12BO75342 701 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 WISP3O95389 354 aaPredicted RBP11.21□□□□□ -0.61
VRK1-204ENST00000555351 GSTM2P28161 218 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 TSFMP43897 325 aaKnown RBP11.21□□□□□ -0.61
VRK1-204ENST00000555351 AGTR2P50052 363 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 SLC12A2P55011 1212 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 Q0VFX4 171 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 MFAP5Q13361 173 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 CSHL1Q14406 222 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 SPNS2Q8IVW8 549 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 AFAP1L2Q8N4X5 818 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 OR9A4Q8NGU2 314 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 NT5CQ8TCD5 201 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 SLC5A11Q8WWX8 675 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 METTL21AQ8WXB1 218 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 THOC3Q96J01 351 aaKnown RBP11.21□□□□□ -0.61
VRK1-204ENST00000555351 SEC16BQ96JE7 1060 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 TUBB6Q9BUF5 446 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 YIPF2Q9BWQ6 316 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 CAPS2Q9BXY5 557 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 MFRPQ9BY79 579 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 PITHD1Q9GZP4 211 aaPredicted RBP11.21□□□□□ -0.61
VRK1-204ENST00000555351 ILKAPQ9H0C8 392 aaPredicted RBP11.21□□□□□ -0.61
VRK1-204ENST00000555351 ZNF160Q9HCG1 818 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 TXNDC16Q9P2K2 825 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 C19orf25Q9UFG5 118 aaPredicted RBP11.21□□□□□ -0.61
VRK1-204ENST00000555351 ZFP69BQ9UJL9 534 aa11.21□□□□□ -0.61
VRK1-204ENST00000555351 SH2B3Q9UQQ2 575 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms