RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PKNOX1P55347 436 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 WDR4P57081 412 aaKnown RBP13.66□□□□□ -0.22
CHD8-208ENST00000555301 VSX2P58304 361 aaPredicted RBP13.66□□□□□ -0.22
CHD8-208ENST00000555301 ARF3P61204 181 aaPredicted RBP13.66□□□□□ -0.22
CHD8-208ENST00000555301 TRAF3Q13114 568 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 GGTA1PQ4G0N0 100 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 FRMPD2BQ6IN97 320 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 MED27Q6P2C8 311 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 TLDC1Q6P9B6 456 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 RPS27LQ71UM5 84 aaKnown RBP13.66□□□□□ -0.22
CHD8-208ENST00000555301 HOMEZQ8IX15 550 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 CAMKVQ8NCB2 501 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 ZNF740Q8NDX6 193 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 TRPV3Q8NET8 790 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 OR4F6Q8NGB9 312 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 OR1L3Q8NH93 324 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 MGARPQ8TDB4 240 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 REPS1Q96D71 796 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 NXPE2Q96DL1 559 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 SLC46A1Q96NT5 459 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 NLNQ9BYT8 704 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 SPNS1Q9H2V7 528 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 APMAPQ9HDC9 416 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 MLXIPLQ9NP71 852 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 TRPS1Q9UHF7 1281 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 ZFP69BQ9UJL9 534 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 PCDHGA11Q9Y5H2 935 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 AP1M2Q9Y6Q5 423 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 LOC105369274A0A096LPK9 316 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 LOC102723532A0A0G2JNH3 316 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 PMS2P1A4D2B8 440 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 TRABD2BA6NFA1 517 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 H0YIV9 168 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 NVLO15381 856 aaKnown RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 ZSCAN9O15535 394 aaPredicted RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 LCMT2O60294 686 aaKnown RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 DXOO77932 396 aaKnown RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 ESRRBO95718 433 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 EIF2S1P05198 315 aaKnown RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 SLC35G6P0C7Q6 338 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 TSPAN8P19075 237 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 SPINK2P20155 84 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 CD22P20273 847 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 NR1D1P20393 614 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 GRK2P25098 689 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 SERPINB1P30740 379 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 SHC2P98077 582 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 GALNT1Q10472 559 aaPredicted RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 GRM7Q14831 915 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 WASHC2DQ5SRD0 308 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 MANEAQ5SRI9 462 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 C10orf62Q5T681 223 aaPredicted RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 GPRIN3Q6ZVF9 776 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 ASPGQ86U10 573 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 TRIM42Q8IWZ5 723 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 LAS2Q8IYD9 372 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 OR4N4Q8N0Y3 316 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 CSNK1A1LQ8N752 337 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 TTC29Q8NA56 475 aaPredicted RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 SLC13A3Q8WWT9 602 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 USP7Q93009 1102 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 MOCOSQ96EN8 888 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 CDK15Q96Q40 435 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 CTRCQ99895 268 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 EML4Q9HC35 981 aaKnown RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 ACSS2Q9NR19 701 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 ADGRE2Q9UHX3 823 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 ANGPTL2Q9UKU9 493 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 RNF11Q9Y3C5 154 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 TSC22D4Q9Y3Q8 395 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 PCDHB3Q9Y5E6 796 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 PCDHGA7Q9Y5G6 932 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 AK5Q9Y6K8 562 aa13.65□□□□□ -0.22
CHD8-208ENST00000555301 CNOT1A5YKK6 2376 aaKnown RBP13.65□□□□□ -0.22
CHD8-208ENST00000555301 UNC13CQ8NB66 2214 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 FITM1A5D6W6 292 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 ANKDD1BA6NHY2 528 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 C9orf172C9J069 976 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 H3BMH7 237 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 PPP6CO00743 305 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 SCRG1O75711 98 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 SNUPNO95149 360 aaKnown RBP13.64□□□□□ -0.23
CHD8-208ENST00000555301 SERPINE1P05121 402 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 ENO1P06733 434 aaKnown RBP13.64□□□□□ -0.23
CHD8-208ENST00000555301 HBQ1P09105 142 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 ARSFP54793 590 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 EMP3P54852 163 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 ERVPABLB-1P60509 514 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 PHEXP78562 749 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 PWP1Q13610 501 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 RCN2Q14257 317 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 CHI3L2Q15782 390 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 CPSF6Q16630 551 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHD8-208ENST00000555301 FAM214AQ32MH5 1076 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 YOD1Q5VVQ6 348 aaPredicted RBP13.64□□□□□ -0.23
CHD8-208ENST00000555301 PWWP2BQ6NUJ5 590 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 ZCCHC23Q6ZST2 131 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 VN1R4Q7Z5H5 301 aa13.64□□□□□ -0.23
CHD8-208ENST00000555301 TMEM126BQ8IUX1 230 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms