RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MAP7Q14244 749 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 STPG1Q5TH74 334 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 SBSNQ6UWP8 590 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 LRRTM4Q86VH4 590 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 SFTPA2Q8IWL1 248 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 TBC1D21Q8IYX1 336 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 MYO1HQ8N1T3 1032 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 SNX31Q8N9S9 440 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 METTL6Q8TCB7 284 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 HM13Q8TCT9 377 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 LMX1AQ8TE12 382 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 POP5Q969H6 163 aaKnown RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 PPP3R2Q96LZ3 170 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 ZCCHC2Q9C0B9 1178 aaKnown RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 RDH14Q9HBH5 336 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 GIMAP2Q9UG22 337 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 GPR34Q9UPC5 381 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 BTBD3Q9Y2F9 522 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 AP3M1Q9Y2T2 418 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 H3BM21 787 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 ARPC2O15144 300 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 FFAR2O15552 330 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 FOXD2O60548 495 aaPredicted RBP16.77■□□□□ 0.28
SHOX-204ENST00000554971 WDR47O94967 919 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 H6PDO95479 791 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 ACP5P13686 325 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 PRDX3P30048 256 aaKnown RBP16.77■□□□□ 0.28
SHOX-204ENST00000554971 LSAMPQ13449 338 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 GTF2H2Q13888 395 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 ZNF658BQ4V348 819 aaPredicted RBP16.77■□□□□ 0.28
SHOX-204ENST00000554971 BCL7AQ4VC05 210 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 NHSL2Q5HYW2 709 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 TMTC4Q5T4D3 741 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 SULT1C3Q6IMI6 304 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 GTF2H2CQ6P1K8 395 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 Q6ZSR9 355 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 FKBP9P1Q75LS8 142 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 SATL1Q86VE3 508 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 SPPL2CQ8IUH8 684 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 FNDC5Q8NAU1 212 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 UBTD2Q8WUN7 234 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 TFAP2CQ92754 450 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 KCTD14Q9BQ13 255 aaPredicted RBP16.77■□□□□ 0.28
SHOX-204ENST00000554971 IL1RL2Q9HB29 575 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 FREM2Q5SZK8 3169 aa16.77■□□□□ 0.28
SHOX-204ENST00000554971 UNC13CQ8NB66 2214 aa16.77■□□□□ 0.27
SHOX-204ENST00000554971 LMO7DNF2Z398 122 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 EIF3FO00303 357 aaPredicted RBP16.76■□□□□ 0.27
SHOX-204ENST00000554971 YY2O15391 372 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 TIPRLO75663 272 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 CBSLP0DN79 551 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 CBSP35520 551 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 PIK3CGP48736 1102 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 GSK3BP49841 420 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 UFM1P61960 85 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 LIPEQ05469 1076 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 NRF1Q16656 503 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 GOLGA7Q7Z5G4 137 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 AMIGO2Q86SJ2 522 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 ADGRG5Q8IZF4 528 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 LILRA3Q8N6C8 439 aaPredicted RBP16.76■□□□□ 0.27
SHOX-204ENST00000554971 CDYL2Q8N8U2 506 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 OR2T11Q8NH01 316 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 PROKR1Q8TCW9 393 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 LKAAEAR1Q8TD35 194 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 PRPF18Q99633 342 aaKnown RBP16.76■□□□□ 0.27
SHOX-204ENST00000554971 SLC29A1Q99808 456 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 CIB1Q99828 191 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 TUBA8Q9NY65 449 aaPredicted RBP16.76■□□□□ 0.27
SHOX-204ENST00000554971 PTTG2Q9NZH5 202 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 SPASTQ9UBP0 616 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 KCNK6Q9Y257 313 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 MYRFQ9Y2G1 1151 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 ANKRD12Q6UB98 2062 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 CELSR3Q9NYQ7 3312 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 IQCF5A8MTL0 148 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 CFAP99D6REC4 459 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 KMOO15229 486 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 YKT6O15498 198 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 EML2O95834 649 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 CTSEP14091 401 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 JAK1P23458 1154 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 GTF2H3Q13889 308 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 DEFB133Q30KQ1 61 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 UAP1L1Q3KQV9 507 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 TTLL9Q3SXZ7 439 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 KRT80Q6KB66 452 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 FAM83HQ6ZRV2 1179 aaPredicted RBP16.76■□□□□ 0.27
SHOX-204ENST00000554971 SPRED1Q7Z699 444 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 FAM122AQ96E09 287 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 ZNF514Q96K75 400 aaPredicted RBP16.76■□□□□ 0.27
SHOX-204ENST00000554971 LINC00615Q96LM1 132 aaPredicted RBP16.76■□□□□ 0.27
SHOX-204ENST00000554971 TMEM79Q9BSE2 394 aa16.76■□□□□ 0.27
SHOX-204ENST00000554971 SARS2Q9NP81 518 aaKnown RBP16.76■□□□□ 0.27
SHOX-204ENST00000554971 COL5A1P20908 1838 aaPredicted RBP16.76■□□□□ 0.27
SHOX-204ENST00000554971 CEP295Q9C0D2 2601 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 ASPDHA6ND91 283 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 SLC28A1O00337 649 aa16.75■□□□□ 0.27
SHOX-204ENST00000554971 POP7O75817 140 aaKnown RBP16.75■□□□□ 0.27
SHOX-204ENST00000554971 PGM3O95394 542 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms