RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 KCT2Q8NC54 265 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 OR2W6PQ8NHA6 318 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 STAG3L4Q8TBR4 150 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 PROKR1Q8TCW9 393 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 AENQ8WTP8 325 aaKnown RBP11.77□□□□□ -0.53
SYNE2-214ENST00000554928 MESP1Q9BRJ9 268 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 AICDAQ9GZX7 198 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 TXLNGQ9NUQ3 528 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 NUDT4Q9NZJ9 180 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 CTSFQ9UBX1 484 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 TBK1Q9UHD2 729 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 DYRK1BQ9Y463 629 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 IKBKGQ9Y6K9 419 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 ATMQ13315 3056 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 HEATR5BQ9P2D3 2071 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 PCM1Q15154 2024 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 KCNE1BA0A087WTH5 132 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 A0A0A6YYC8 382 aaPredicted RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 A0A1W2PPM1 405 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 SMIM23A6NLE4 172 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 I3L1I5 382 aaPredicted RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 GOLGA8RI6L899 631 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 MASP2O00187 686 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 MAP2K7O14733 419 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 OR1F1O43749 312 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 CCNT2O60583 730 aaKnown RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 DNAJB6O75190 326 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 KRT38O76015 456 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 SNRPAP09012 282 aaKnown RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 RAB40ALP0C0E4 278 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 CD22P20273 847 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 SCTRP47872 440 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 HNMTP50135 292 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 CCR8P51685 355 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 ARSFP54793 590 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 RPS15AP62244 130 aaKnown RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 CDC16Q13042 620 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 NAA25Q14CX7 972 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 SYT16Q17RD7 645 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 DEFB109BQ30KR1 87 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 SOWAHCQ53LP3 525 aaPredicted RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 TIFABQ6ZNK6 161 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 SHISA6Q6ZSJ9 500 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 TMEM151AQ8N4L1 468 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 EXD3Q8N9H8 876 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 ZCCHC10Q8TBK6 192 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 ADAMTS17Q8TE56 1095 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 EPS8L3Q8TE67 593 aaKnown RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 RERGQ96A58 199 aaPredicted RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 TM4SF19Q96DZ7 209 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 CABS1Q96KC9 395 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 PARD6BQ9BYG5 372 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 NLNQ9BYT8 704 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 SEMA4CQ9C0C4 833 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 PELI2Q9HAT8 420 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 DNAJC11Q9NVH1 559 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 GEMIN8Q9NWZ8 242 aaKnown RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 IFT80Q9P2H3 777 aaPredicted RBP11.76□□□□□ -0.53
SYNE2-214ENST00000554928 XPR1Q9UBH6 696 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 KCND3Q9UK17 655 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 TCFL5Q9UL49 500 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 SEC16AO15027 2179 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 CACNA1GO43497 2377 aa11.76□□□□□ -0.53
SYNE2-214ENST00000554928 TRBC2A0A5B9 178 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 C4orf51C9J302 202 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 TK2O00142 265 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 STK16O75716 305 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 SIX3O95343 332 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-214ENST00000554928 ONECUT2O95948 504 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 UMODP07911 640 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 AGXTP21549 392 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 HRH2P25021 359 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 CNTFP26441 200 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 EFNA3P52797 238 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 RPS15P62841 145 aaKnown RBP11.75□□□□□ -0.53
SYNE2-214ENST00000554928 MAT1AQ00266 395 aaKnown RBP11.75□□□□□ -0.53
SYNE2-214ENST00000554928 CHAF1BQ13112 559 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 LY6DQ14210 128 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 SLBPQ14493 270 aaKnown RBP eCLIP11.75□□□□□ -0.53
SYNE2-214ENST00000554928 ACAP2Q15057 778 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 PFKFB4Q16877 469 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 FAM83EQ2M2I3 478 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 CPZQ66K79 652 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 TAOK1Q7L7X3 1001 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 VN1R5Q7Z5H4 357 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 ASPGQ86U10 573 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 PDSS2Q86YH6 399 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.75□□□□□ -0.53
SYNE2-214ENST00000554928 PRSS58Q8IYP2 241 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 AMER2Q8N7J2 671 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 AMER3Q8N944 861 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 SNX31Q8N9S9 440 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 ZSCAN1Q8NBB4 408 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 OR9A4Q8NGU2 314 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 RHEBL1Q8TAI7 183 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 UBTD2Q8WUN7 234 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 SPSB2Q99619 263 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 EFHD1Q9BUP0 239 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 SARGQ9BW04 601 aa11.75□□□□□ -0.53
SYNE2-214ENST00000554928 GPR87Q9BY21 358 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms