RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 THOC6Q86W42 341 aaKnown RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 LGI4Q8N135 537 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 OR10G2Q8NGC3 310 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 DEFB118Q96PH6 123 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 YTHDF1Q9BYJ9 559 aaKnown RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 OR51E2Q9H255 320 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 GORASP2Q9H8Y8 452 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 PCDHGA10Q9Y5H3 936 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 SNPHO15079 494 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 SLC16A8O95907 504 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 NPPAP01160 153 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 PRPS2P11908 318 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 NNMTP40261 264 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 NPRL3Q12980 569 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 CSTF3Q12996 717 aaKnown RBP11.46□□□□□ -0.57
XRCC3-208ENST00000554811 RFX4Q33E94 735 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 KIAA1614Q5VZ46 1190 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF852Q6ZMS4 543 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 SPATC1Q76KD6 591 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 OLIG3Q7RTU3 272 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 GPR65Q8IYL9 337 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 SLC5A8Q8N695 610 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 DCAF4L2Q8NA75 395 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 GOLM1Q8NBJ4 401 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 WDR36Q8NI36 951 aaKnown RBP11.46□□□□□ -0.57
XRCC3-208ENST00000554811 DNASE1L2Q92874 299 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 TADA1Q96BN2 335 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 WDR12Q9GZL7 423 aaKnown RBP11.46□□□□□ -0.57
XRCC3-208ENST00000554811 RLIMQ9NVW2 624 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 SIRT5Q9NXA8 310 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 TOR4AQ9NXH8 423 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.46□□□□□ -0.57
XRCC3-208ENST00000554811 A6NL46 340 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 CNOT3O75175 753 aaKnown RBP11.46□□□□□ -0.57
XRCC3-208ENST00000554811 C7P10643 843 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 FPR1P21462 350 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 PDHA2P29803 388 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 TMEM220Q6QAJ8 160 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 TMEM25Q86YD3 366 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 ISG20Q96AZ6 181 aaKnown RBP11.46□□□□□ -0.57
XRCC3-208ENST00000554811 YME1L1Q96TA2 773 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 MRPL9Q9BYD2 267 aaKnown RBP11.46□□□□□ -0.57
XRCC3-208ENST00000554811 HCFC1R1Q9NWW0 138 aa11.46□□□□□ -0.57
XRCC3-208ENST00000554811 TMEFF2Q9UIK5 374 aaPredicted RBP11.46□□□□□ -0.57
XRCC3-208ENST00000554811 CATP04040 527 aaKnown RBP11.46□□□□□ -0.58
XRCC3-208ENST00000554811 KLK1P06870 262 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 IMPDH2P12268 514 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 ATP1B2P14415 290 aaPredicted RBP11.46□□□□□ -0.58
XRCC3-208ENST00000554811 TNNI3P19429 210 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 HSPB3Q12988 150 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 ATG9BQ674R7 924 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 AGTRAPQ6RW13 159 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 OTOP2Q7RTS6 562 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 SLC34A3Q8N130 599 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 PAPD5Q8NDF8 572 aaKnown RBP11.46□□□□□ -0.58
XRCC3-208ENST00000554811 ASZ1Q8WWH4 475 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 TUBA1CQ9BQE3 449 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 YIPF4Q9BSR8 244 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 OSGEPL1Q9H4B0 414 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 KIAA1522Q9P206 1035 aaPredicted RBP11.46□□□□□ -0.58
XRCC3-208ENST00000554811 POU2F3Q9UKI9 436 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 CACNA1CQ13936 2221 aa11.46□□□□□ -0.58
XRCC3-208ENST00000554811 ZSWIM8A7E2V4 1837 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 KLK8O60259 260 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 PCDHGA12O60330 932 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 CPNE6O95741 557 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 GSTM1P09488 218 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 PRPS1L1P21108 318 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 DMPKQ09013 629 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 LEXMQ3ZCV2 418 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 NIPAL1Q6NVV3 410 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 TPRG1Q6ZUI0 275 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 NCCRP1Q6ZVX7 275 aaPredicted RBP11.45□□□□□ -0.58
XRCC3-208ENST00000554811 NEK10Q6ZWH5 1172 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 MMP21Q8N119 569 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 FAM83FQ8NEG4 500 aaPredicted RBP11.45□□□□□ -0.58
XRCC3-208ENST00000554811 MUL1Q969V5 352 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 ALPK1Q96QP1 1244 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 SLC35A5Q9BS91 424 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 CNPPD1Q9BV87 410 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 KLF16Q9BXK1 252 aaPredicted RBP11.45□□□□□ -0.58
XRCC3-208ENST00000554811 CEP44Q9C0F1 390 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 ERVK13-1Q9NX77 482 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 SPG21Q9NZD8 308 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 TRPS1Q9UHF7 1281 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 CCL26Q9Y258 94 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 RPLP2P05387 115 aaKnown RBP11.45□□□□□ -0.58
XRCC3-208ENST00000554811 ACRP10323 421 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 NR4A2P43354 598 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 CTSCP53634 463 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 UGT8Q16880 541 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 TRIM71Q2Q1W2 868 aaKnown RBP11.45□□□□□ -0.58
XRCC3-208ENST00000554811 COX20Q5RI15 118 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 LAIR1Q6GTX8 287 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 KLHL17Q6TDP4 642 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 PTCHD4Q6ZW05 846 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 CHST9Q7L1S5 443 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 ZNF551Q7Z340 670 aaPredicted RBP11.45□□□□□ -0.58
XRCC3-208ENST00000554811 RNF130Q86XS8 419 aa11.45□□□□□ -0.58
XRCC3-208ENST00000554811 C11orf65Q8NCR3 313 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms