RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CHCHD4Q8N4Q1 142 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 SMYD1Q8NB12 490 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 FAM76AQ8TAV0 307 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 RNASE8Q8TDE3 154 aaKnown RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 FAM46BQ96A09 425 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 CENPTQ96BT3 561 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 AP2M1Q96CW1 435 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 PDLIM5Q96HC4 596 aaKnown RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 RBM41Q96IZ5 413 aaKnown RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 PANX3Q96QZ0 392 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 MAP3K3Q99759 626 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ATG101Q9BSB4 218 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 PI4K2AQ9BTU6 479 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ACPTQ9BZG2 426 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 SLC39A8Q9C0K1 460 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ZNF696Q9H7X3 374 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 MID1IP1Q9NPA3 183 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 TMOD3Q9NYL9 352 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 NOCTQ9UK39 431 aaKnown RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 STX8Q9UNK0 236 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 GPR132Q9UNW8 380 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 RPGRIP1LQ68CZ1 1315 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SDR42E2A6NKP2 422 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 TMEM150CB9EJG8 249 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 ATP9AO75110 1047 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 GLCEO94923 617 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 CD48P09326 243 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SFTPDP35247 375 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 MAP2K2P36507 400 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 FRKP42685 505 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SERPINH1P50454 418 aaKnown RBP2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SMSP52788 366 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 OPCMLQ14982 345 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 MORF4L2Q15014 288 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 TAF13Q15543 124 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SGCBQ16585 318 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 ZNF542PQ5EBM4 170 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 CEP85LQ5SZL2 805 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SPOUT1Q5T280 376 aaKnown RBP2.78□□□□□ -1.96
SCFD1-213ENST00000554776 C20orf194Q5TEA3 1177 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 ARHGEF16Q5VV41 709 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 PM20D1Q6GTS8 502 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 FUT10Q6P4F1 479 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 TMEM207Q6UWW9 146 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 AMER3Q8N944 861 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 CNBD1Q8NA66 436 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 NEK11Q8NG66 645 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 OR13C3Q8NGS6 347 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SAP25Q8TEE9 199 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 NEDD4LQ96PU5 975 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 F2RL3Q96RI0 385 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SDCBP2Q9H190 292 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 P2RY12Q9H244 342 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 ACTL8Q9H568 366 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 RNF121Q9H920 327 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 RAVER2Q9HCJ3 691 aaKnown RBP2.78□□□□□ -1.96
SCFD1-213ENST00000554776 CHST11Q9NPF2 352 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SLC52A3Q9NQ40 469 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 SLCO1C1Q9NYB5 712 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 TRPC4Q9UBN4 977 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 FETUBQ9UGM5 382 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 PA2G4Q9UQ80 394 aaKnown RBP2.78□□□□□ -1.96
SCFD1-213ENST00000554776 NCKAP1Q9Y2A7 1128 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 PPP2R2CQ9Y2T4 447 aa2.78□□□□□ -1.96
SCFD1-213ENST00000554776 KIAA1217Q5T5P2 1943 aa2.78□□□□□ -1.97
SCFD1-213ENST00000554776 STK36Q9NRP7 1315 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 TRAV18A0A075B6X5 111 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 TRBV5-5A0A0J9YX44 114 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 ILVBLA1L0T0 632 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 DDX39AO00148 427 aaKnown RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 VEGFDO43915 354 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 PCDH7O60245 1069 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 ZG16O60844 167 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 RTN2O75298 545 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 TRMUO75648 421 aaKnown RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 DFFBO76075 338 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 CGAP01215 116 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 CALCAP01258 141 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 C9P02748 559 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 ATP1B1P05026 303 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 GPIP06744 558 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 PRSS56P0CW18 603 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 C8orf89P0DMQ9 161 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 VCLP18206 1134 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 CA6P23280 308 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 DNA2P51530 1060 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 NR0B1P51843 470 aaKnown RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 KIAA1024LP59773 190 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 AKAP17AQ02040 695 aaKnown RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 NPRL3Q12980 569 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 RPS6KA1Q15418 735 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 CDC37Q16543 378 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 GTDC1Q4AE62 458 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 AARDQ4LEZ3 155 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 IFI44LQ53G44 452 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF770Q6IQ21 691 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 FAM53AQ6NSI3 398 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 UGT3A1Q6NUS8 523 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 SH2D5Q6ZV89 423 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms