RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CARD9Q9H257 536 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 DPEP2Q9H4A9 486 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 RMI1Q9H9A7 625 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 EPB41L5Q9HCM4 733 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 THSD1Q9NS62 852 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 KLC4Q9NSK0 619 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 PNPOQ9NVS9 261 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ATXN10Q9UBB4 475 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 TBC1D29Q9UFV1 150 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 RSPH14Q9UHP6 348 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 KCNK6Q9Y257 313 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 LOXL2Q9Y4K0 774 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 COL6A6A6NMZ7 2263 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 SDK2Q58EX2 2172 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 NBEAQ8NFP9 2946 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 FASNP49327 2511 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ATRXP46100 2492 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 PIKFYVEQ9Y2I7 2098 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 IGSF10Q6WRI0 2623 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 IGHV1OR21-1A0A087WYE8 117 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 IGHV5-10-1A0A0J9YXX1 117 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 MACROD2A1Z1Q3 448 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 GPR89AB7ZAQ6 455 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 TMX2-CTNND1H3BSU7 103 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 H7C0C1 242 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 CHUKO15111 745 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 KCNN4O15554 427 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 RRP8O43159 456 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 MTX2O75431 263 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 RBMXL2O75526 392 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 TNFSF15O95150 251 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 UNC5CO95185 931 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 IPO7O95373 1038 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 CPNE6O95741 557 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 FTCDO95954 541 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 AGTP01019 485 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ITGA2BP08514 1039 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 GPR89BP0CG08 455 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 THRAP10827 490 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ITIH1P19827 911 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 HLA-DPA1P20036 260 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 PSMB4P28070 264 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 CD1CP29017 333 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 RBMS1P29558 406 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 UGT1A5P35504 534 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 HMGCLP35914 325 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SPAM1P38567 509 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ATP5OP48047 213 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 KCNJ5P48544 419 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 CLCN2P51788 898 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 CLCNKAP51800 687 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF140P52738 457 aaPredicted RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF134P52741 427 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 GEMP55040 296 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 NAP1L1P55209 391 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 RWDD2BP57060 319 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 EIF3EP60228 445 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 EIF3IQ13347 325 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 MSLNQ13421 630 aaPredicted RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 OLIG2Q13516 323 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 PEX6Q13608 980 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SLC1A5Q15758 541 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 TBCCQ15814 346 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 CHRNA6Q15825 494 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 AMZ1Q400G9 498 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ATP13A5Q4VNC0 1218 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SOWAHCQ53LP3 525 aaPredicted RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 COLEC12Q5KU26 742 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ANKRD20A2Q5SQ80 823 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ANKRD20A1Q5TYW2 823 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ANKRD20A3Q5VUR7 823 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 NKAIN2Q5VXU1 208 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF788Q6ZQV5 615 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 RAB11FIP2Q7L804 512 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 PID1Q7Z2X4 250 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 PEX26Q7Z412 305 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 C11orf96Q7Z7L8 435 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 KIAA1328Q86T90 577 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF547Q8IVP9 402 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SFRP1Q8N474 314 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 FBXO39Q8N4B4 442 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SLC25A41Q8N5S1 370 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 SPC24Q8NBT2 197 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF248Q8NDW4 579 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 CCDC110Q8TBZ0 833 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 DTX3LQ8TDB6 740 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 BLOC1S5Q8TDH9 187 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 BRIX1Q8TDN6 353 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 KCNE4Q8WWG9 221 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 DDB2Q92466 427 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 FAM136AQ96C01 138 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 NAF1Q96HR8 494 aaKnown RBP4.06□□□□□ -1.76
VTI1B-203ENST00000554636 PBKQ96KB5 322 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 VPS35Q96QK1 796 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 TIMM29Q9BSF4 260 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 ZSCAN5AQ9BUG6 496 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 FICDQ9BVA6 458 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 AMBRA1Q9C0C7 1298 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 OR2AG1Q9H205 316 aa4.06□□□□□ -1.76
VTI1B-203ENST00000554636 TRABDQ9H4I3 376 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms