RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 VPS26BQ4G0F5 336 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ARMC4Q5T2S8 1044 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF684Q5T5D7 378 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 KIAA1614Q5VZ46 1190 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GLYATQ6IB77 296 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 C1orf94Q6P1W5 598 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CNKSR3Q6P9H4 555 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LRRC8DQ7L1W4 858 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 TAS1R1Q7RTX1 841 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 GPR141Q7Z602 305 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LYPD6Q86Y78 171 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CCDC103Q8IW40 242 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 RGL4Q8IZJ4 473 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 DHRSXQ8N5I4 330 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SLC15A4Q8N697 577 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 LSM14AQ8ND56 463 aaKnown RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SIMC1Q8NDZ2 872 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 VANGL1Q8TAA9 524 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SLC38A4Q969I6 547 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 VPS33AQ96AX1 596 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FBXL20Q96IG2 436 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 COQ7Q99807 217 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 DDX31Q9H8H2 851 aaKnown RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 FANCFQ9NPI8 374 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 MARCH2Q9P0N8 246 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 MARCOQ9UEW3 520 aaPredicted RBP3.32□□□□□ -1.88
SEC23A-207ENST00000554615 KLHL3Q9UH77 587 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 VPS51Q9UID3 782 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 BLOC1S6Q9UL45 172 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CBLCQ9ULV8 474 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 CDC14AQ9UNH5 594 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 RNF6Q9Y252 685 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 SH3GLB1Q9Y371 365 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 PTGDR2Q9Y5Y4 395 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 STON1Q9Y6Q2 735 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 EML6Q6ZMW3 1958 aa3.32□□□□□ -1.88
SEC23A-207ENST00000554615 A0A1W2PRQ8 180 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 AGAP5A6NIR3 686 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SAGE2PA6NJ88 616 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 GSTA4O15217 222 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TPST2O60704 377 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 EFCAB14O75071 495 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 DEAF1O75398 565 aaPredicted RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MSL3P1P0C860 447 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ACADMP11310 421 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SLC2A4P14672 509 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TPH1P17752 444 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 IL10P22301 178 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 FCARP24071 287 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MPZP25189 248 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MAPK1P28482 360 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CALCRP30988 508 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 GRK5P34947 590 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 BSGP35613 385 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 HNF1BP35680 557 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 KRT20P35900 424 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SLC19A1P41440 591 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 OR1G1P47890 313 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 RAG2P55895 527 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM62Q0P6H9 643 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TPBGQ13641 420 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 DGCR6Q14129 220 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TEAD4Q15561 434 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 RABL3Q5HYI8 236 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 DGKKQ5KSL6 1271 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SCYL2Q6P3W7 929 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 UNQ9370/PRO34162Q6UXP9 181 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PLEKHG7Q6ZR37 379 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 UBE3DQ7Z6J8 389 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SPPL2CQ8IUH8 684 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 FBXL6Q8N531 539 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 NANOGP1Q8N7R0 232 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 FAM47BQ8NA70 645 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SLAIN1Q8ND83 568 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 GPR26Q8NDV2 337 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SETD9Q8NE22 299 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TOR1AIP2Q8NFQ8 470 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 EDEM1Q92611 657 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SLC47A1Q96FL8 570 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 AHCYL2Q96HN2 611 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PAWRQ96IZ0 340 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 KCTD14Q9BQ13 255 aaPredicted RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TCHPQ9BT92 498 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TEX101Q9BY14 249 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 AP5M1Q9H0R1 490 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SERHL2Q9H4I8 314 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PPP1R3EQ9H7J1 279 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CCSER2Q9H7U1 834 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MARCH7Q9H992 704 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PRDM8Q9NQV8 689 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 THUMPD1Q9NXG2 353 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 UTS2RQ9UKP6 389 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 DIMT1Q9UNQ2 313 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SCAF8Q9UPN6 1271 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SLC6A5Q9Y345 797 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 B3GALT1Q9Y5Z6 326 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 HTTP42858 3142 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PRAMEF27A3QJZ7 478 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 A6NCN8 305 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms