RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 RARRES3Q9UL19 164 aa11.71□□□□□ -0.53
SHMT2-209ENST00000553949 ZNF490Q9ULM2 529 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-209ENST00000553949 WASF3Q9UPY6 502 aa11.71□□□□□ -0.53
SHMT2-209ENST00000553949 PCDHGA8Q9Y5G5 932 aa11.71□□□□□ -0.53
SHMT2-209ENST00000553949 H0YIV9 168 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 OR2B3O76000 313 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 ESRRBO95718 433 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 SERPINE1P05121 402 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 EIF2S1P05198 315 aaKnown RBP11.7□□□□□ -0.54
SHMT2-209ENST00000553949 CHRNGP07510 517 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 FGF5P12034 268 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 SPINK2P20155 84 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 GRK2P25098 689 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 AHRP35869 848 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 MAPK10P53779 464 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 PKNOX1P55347 436 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 ITGA1P56199 1179 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 VSX2P58304 361 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-209ENST00000553949 RAB15P59190 212 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 GABREP78334 506 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 RCN2Q14257 317 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 CPSF6Q16630 551 aaKnown RBP eCLIP11.7□□□□□ -0.54
SHMT2-209ENST00000553949 ARL13AQ5H913 290 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-209ENST00000553949 TCTE1Q5JU00 501 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 CES4AQ5XG92 561 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 VN1R4Q7Z5H5 301 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 ASPGQ86U10 573 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 PPP1R3BQ86XI6 285 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.7□□□□□ -0.54
SHMT2-209ENST00000553949 LAS2Q8IYD9 372 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 LSMEM2Q8N112 164 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 CSNK1A1LQ8N752 337 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 ANKRD53Q8N9V6 530 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 OR8K5Q8NH50 307 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 PMEPA1Q969W9 287 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 TAAR9Q96RI9 348 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 CTRCQ99895 268 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 DDA1Q9BW61 102 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 SPRTNQ9H040 489 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-209ENST00000553949 POLR1BQ9H9Y6 1135 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 APMAPQ9HDC9 416 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 MID1IP1Q9NPA3 183 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 ENAMQ9NRM1 1142 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 STARD5Q9NSY2 213 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 INTS9Q9NV88 658 aaKnown RBP11.7□□□□□ -0.54
SHMT2-209ENST00000553949 IRAK4Q9NWZ3 460 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 TRPS1Q9UHF7 1281 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 ZFP69BQ9UJL9 534 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 SERTAD3Q9UJW9 196 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 ZNF225Q9UK10 706 aa11.7□□□□□ -0.54
SHMT2-209ENST00000553949 TMEM114B3SHH9 223 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 H3BMH7 237 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 P2RX6O15547 441 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 OR4F21O95013 312 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 TNFSF15O95150 251 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 STATHP02808 62 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 ENO1P06733 434 aaKnown RBP11.69□□□□□ -0.54
SHMT2-209ENST00000553949 CAPN1P07384 714 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 ADRB1P08588 477 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 PCNAP12004 261 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 GSTM2P28161 218 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 ARRB2P32121 409 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 ATP1A2P50993 1020 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 CYP4F2P78329 520 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 GALNT1Q10472 559 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-209ENST00000553949 STX3Q13277 289 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 ZRSR2Q15696 482 aaKnown RBP11.69□□□□□ -0.54
SHMT2-209ENST00000553949 WASHC2DQ5SRD0 308 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 DCAF12Q5T6F0 453 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 ADNP2Q6IQ32 1131 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 TLDC1Q6P9B6 456 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 CEACAM20Q6UY09 585 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 CUZD1Q86UP6 607 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 TRIM42Q8IWZ5 723 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 GPR135Q8IZ08 494 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 ARFGAP2Q8N6H7 521 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 CDYL2Q8N8U2 506 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 TTLQ8NG68 377 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 OR7G3Q8NG95 312 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 DYDC1Q8WWB3 177 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 SLC13A3Q8WWT9 602 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 USP7Q93009 1102 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 REPS1Q96D71 796 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 TM4SF19Q96DZ7 209 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 SEC16BQ96JE7 1060 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 SCNM1Q9BWG6 230 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 ASPSCR1Q9BZE9 553 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 SHCBP1LQ9BZQ2 653 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 NRSN2Q9GZP1 204 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 RHBGQ9H310 441 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 MANSC1Q9H8J5 431 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 EML4Q9HC35 981 aaKnown RBP11.69□□□□□ -0.54
SHMT2-209ENST00000553949 NEUROG3Q9Y4Z2 214 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 PCDHGA3Q9Y5H0 932 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 PCDHGA11Q9Y5H2 935 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 AP1M2Q9Y6Q5 423 aa11.69□□□□□ -0.54
SHMT2-209ENST00000553949 ANKDD1BA6NHY2 528 aa11.68□□□□□ -0.54
SHMT2-209ENST00000553949 C9orf172C9J069 976 aa11.68□□□□□ -0.54
SHMT2-209ENST00000553949 TXNDC9O14530 226 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms