RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 POLE2P56282 527 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 IRF8Q02556 426 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 TAP2Q03519 686 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 PCDH1Q08174 1060 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 TRAF3Q13114 568 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 KCNAB2Q13303 367 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 GRB7Q14451 532 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 GGTA1PQ4G0N0 100 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 THEMIS2Q5TEJ8 643 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 METTL21CQ5VZV1 264 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 LIPJQ5W064 366 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 DUS1LQ6P1R4 473 aaKnown RBP13.92□□□□□ -0.18
SHMT2-208ENST00000553868 IYDQ6PHW0 289 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 RBM12BQ8IXT5 1001 aaKnown RBP13.92□□□□□ -0.18
SHMT2-208ENST00000553868 OR4F6Q8NGB9 312 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 OR52B6Q8NGF0 335 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 OR2L8Q8NGY9 312 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 HMGCLL1Q8TB92 370 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 METTL6Q8TCB7 284 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 MIB2Q96AX9 1013 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 SH3KBP1Q96B97 665 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 PYCR2Q96C36 320 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 CCDC28BQ9BUN5 200 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 LRRC61Q9BV99 259 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 NUF2Q9BZD4 464 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 TCEAL2Q9H3H9 227 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-208ENST00000553868 SYNDIG1Q9H7V2 258 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 MRGBPQ9NV56 204 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 KLF15Q9UIH9 416 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 TRIM33Q9UPN9 1127 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 ST14Q9Y5Y6 855 aa13.92□□□□□ -0.18
SHMT2-208ENST00000553868 OTOGQ6ZRI0 2925 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 TMEM233B4DJY2 109 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 PPP6CO00743 305 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 ZNF195O14628 629 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 PLD2O14939 933 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 SKAP2O75563 359 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-208ENST00000553868 VIPP01282 170 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 KRT6AP02538 564 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 KRT6BP04259 564 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 LIPCP11150 499 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 XRCC1P18887 633 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-208ENST00000553868 PKLRP30613 574 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 HNF4AP41235 474 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 MLLT3P42568 568 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-208ENST00000553868 KRT6CP48668 564 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 ZNF33BQ06732 778 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 TSTA3Q13630 321 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-208ENST00000553868 PRAMEF13Q5VWM6 474 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 CLEC6AQ6EIG7 209 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 LETMD1Q6P1Q0 360 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 LCTLQ6UWM7 567 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 B3GNT8Q7Z7M8 397 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 SLC9B2Q86UD5 537 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 ZFAND4Q86XD8 727 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 MYLK4Q86YV6 388 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-208ENST00000553868 CDYL2Q8N8U2 506 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 GBP7Q8N8V2 638 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-208ENST00000553868 L3MBTL4Q8NA19 623 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 FAM46DQ8NEK8 389 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 LMX1AQ8TE12 382 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 TWIST2Q8WVJ9 160 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 C19orf60Q96EN9 201 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 LRRC37BQ96QE4 947 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 ADNPQ9H2P0 1102 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 MEAF6Q9HAF1 191 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 TCF7L2Q9NQB0 619 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 INTS7Q9NVH2 962 aaKnown RBP13.91□□□□□ -0.18
SHMT2-208ENST00000553868 RIC8BQ9NVN3 520 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 SCHIP1Q9P0W5 487 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-208ENST00000553868 CIDEBQ9UHD4 219 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 ANAPC2Q9UJX6 822 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 SNX6Q9UNH7 406 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 PCDHGA7Q9Y5G6 932 aa13.91□□□□□ -0.18
SHMT2-208ENST00000553868 F8P00451 2351 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 KRT87PA6NCN2 255 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 AQP9O43315 295 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 CCNDBP1O95273 360 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 CAPN1P07384 714 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 ANXA6P08133 673 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 BTKQ06187 659 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 CHIT1Q13231 466 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 LAPTM5Q13571 262 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 TCEA2Q15560 299 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 TBCCQ15814 346 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 ZSCAN26Q16670 478 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 ZXDCQ2QGD7 858 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-208ENST00000553868 UGT3A2Q3SY77 523 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 XKR6Q5GH73 641 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 PAGE2BQ5JRK9 111 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 C10orf62Q5T681 223 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-208ENST00000553868 RNF165Q6ZSG1 346 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 ZNF771Q7L3S4 317 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-208ENST00000553868 MAVSQ7Z434 540 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 C17orf64Q86WR6 236 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 DDIASQ8IXT1 998 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 ZSCAN1Q8NBB4 408 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 PPFIBP2Q8ND30 876 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 OR52E1Q8NGJ3 308 aa13.9□□□□□ -0.18
SHMT2-208ENST00000553868 CEP70Q8NHQ1 597 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms