RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TGFBR2P37173 567 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 DCTP40126 519 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 B4GALNT1Q00973 533 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 GALK2Q01415 458 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 HMGCS1Q01581 520 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ZXDCQ2QGD7 858 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-207ENST00000553837 LRRC73Q5JTD7 316 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ERAP2Q6P179 960 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 NEK5Q6P3R8 708 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 FAM122CQ6P4D5 195 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ENPP6Q6UWR7 440 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 MILR1Q7Z6M3 343 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 GATAD2AQ86YP4 633 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 TMC8Q8IU68 726 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 SLC22A15Q8IZD6 547 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ZBTB2Q8N680 514 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 FBXO30Q8TB52 745 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 RHBDF1Q96CC6 855 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 NXF2Q9GZY0 626 aaKnown RBP11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ADPRHL2Q9NX46 363 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 EHD3Q9NZN3 535 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ADGRE2Q9UHX3 823 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 PCDHB14Q9Y5E9 798 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 TNPO3Q9Y5L0 923 aaKnown RBP11.86□□□□□ -0.51
SHMT2-207ENST00000553837 PEX16Q9Y5Y5 336 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 MYOFQ9NZM1 2061 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 DENND4CQ5VZ89 1909 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 PLXNB3Q9ULL4 1909 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 OR2A25A4D2G3 310 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 LILRB3O75022 631 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 OTCP00480 354 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 LHCGRP22888 699 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 GGT5P36269 586 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 TGFBR1P36897 503 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 LAPTM5Q13571 262 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 DUSP7Q16829 419 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 SNAP47Q5SQN1 464 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 ASTLQ6HA08 431 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 CNKSR3Q6P9H4 555 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 MACC1Q6ZN28 852 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 HTR3DQ70Z44 454 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 UTS2BQ765I0 119 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 SPATC1Q76KD6 591 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 DDX53Q86TM3 631 aaKnown RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 HORMAD1Q86X24 394 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 CMTM8Q8IZV2 173 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 NXPE1Q8N323 547 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 FAM86B1Q8N7N1 296 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 BEND7Q8N7W2 519 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 GALNT6Q8NCL4 622 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 ZNF583Q96ND8 569 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 EGFL8Q99944 293 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 ITPAQ9BY32 194 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 FAM126AQ9BYI3 521 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 CD244Q9BZW8 370 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 NUAK2Q9H093 628 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 CARS2Q9HA77 564 aaKnown RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 ITM2CQ9NQX7 267 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 ABCB8Q9NUT2 735 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 RAPGEFL1Q9UHV5 662 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 TMEFF2Q9UIK5 374 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 CRLS1Q9UJA2 301 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 OGDHLQ9ULD0 1010 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 PCDHGB6Q9Y5F9 930 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 TEX51A0A1B0GUA7 166 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 LOC110117498-PIK3R3F6TDL0 507 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 ARNTLO00327 626 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 IFRD1O00458 451 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 TGM5O43548 720 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 BNIP3LO60238 219 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 ARHGEF15O94989 841 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 SRCP12931 536 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 SLC2A4P14672 509 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 HOXB6P17509 224 aaKnown RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 EPORP19235 508 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 DGKAP23743 735 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 PTGS2P35354 604 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 SPAM1P38567 509 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 CSNK1DP48730 415 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 RPL38P63173 70 aaKnown RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 PWP1Q13610 501 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 KEAP1Q14145 624 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 SGO1Q5FBB7 561 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 LRRC66Q68CR7 880 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 PAF1Q8N7H5 531 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 OR2T12Q8NG77 320 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 OR8J3Q8NGG0 315 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 FIBINQ8TAL6 211 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 IPCEF1Q8WWN9 437 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 PIK3R3Q92569 461 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 APOL4Q9BPW4 351 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 ZBTB20Q9HC78 741 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-207ENST00000553837 FBXL12Q9NXK8 326 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 SPG21Q9NZD8 308 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 TMPRSS11EQ9UL52 423 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 ERVW-1Q9UQF0 538 aa11.85□□□□□ -0.51
SHMT2-207ENST00000553837 A0A1W2PRU2 124 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 KRT87PA6NCN2 255 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms