RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ABHD12Q8N2K0 398 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 TSPAN14Q8NG11 270 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 OR4K1Q8NGD4 311 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 C9orf43Q8TAL5 461 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-210ENST00000553693 C11orf45Q8TAV5 145 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 ZPLD1Q8TCW7 415 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 SLC22A18Q96BI1 424 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 RSRC1Q96IZ7 334 aaKnown RBP3.19□□□□□ -1.9
SCFD1-210ENST00000553693 GHITMQ9H3K2 345 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.19□□□□□ -1.94e-7■■■■■ 32.6
SCFD1-210ENST00000553693 MRPL15Q9P015 296 aaKnown RBP3.19□□□□□ -1.9
SCFD1-210ENST00000553693 CTSZQ9UBR2 303 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 ADD3Q9UEY8 706 aaKnown RBP3.19□□□□□ -1.9
SCFD1-210ENST00000553693 IL17BQ9UHF5 180 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 DDX25Q9UHL0 483 aaKnown RBP3.19□□□□□ -1.9
SCFD1-210ENST00000553693 LNPEPQ9UIQ6 1025 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 CHKBQ9Y259 395 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 TMEM5Q9Y2B1 443 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 TTLL3Q9Y4R7 772 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 NCOA2Q15596 1464 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 SCAF11Q99590 1463 aaKnown RBP3.19□□□□□ -1.9
SCFD1-210ENST00000553693 MBD5Q9P267 1494 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 SETBP1Q9Y6X0 1596 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 ADGBQ8N7X0 1667 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 ABCA7Q8IZY2 2146 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 PHLPP1O60346 1717 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 MAP3K1Q13233 1512 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 RTEL1-TNFRSF6BF6WH68 1400 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 AFF2P51816 1311 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 PLEKHH2Q8IVE3 1493 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 CDK12Q9NYV4 1490 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-210ENST00000553693 ARHGAP23Q9P227 1491 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 CCNB3Q8WWL7 1395 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 SNURFLB1AK76 121 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 FPGTO14772 594 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 ENTPD3O75355 529 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 HOXD4P09016 255 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-210ENST00000553693 RAB40ALP0C0E4 278 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 ALOX12P18054 663 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 IL4RP24394 825 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 MPZP25189 248 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 MAPK12P53778 367 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 CALD1Q05682 793 aaKnown RBP3.18□□□□□ -1.9
SCFD1-210ENST00000553693 FCHO2Q0JRZ9 810 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 PTPN14Q15678 1187 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 EXT1Q16394 746 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 MS4A18Q3C1V0 323 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 RILPL1Q5EBL4 403 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 SPATA1Q5VX52 437 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 SEL1L3Q68CR1 1132 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 CDHR3Q6ZTQ4 885 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 FCRLAQ7L513 359 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 LINC00346Q8IVM7 164 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 FAM89BQ8N5H3 189 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 OR7A2PQ8NGA2 310 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 OR10Q1Q8NGQ4 319 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 CFAP61Q8NHU2 1237 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 MOB3AQ96BX8 217 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 NXNL1Q96CM4 212 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 TMCO6Q96DC7 493 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 PDLIM5Q96HC4 596 aaKnown RBP3.18□□□□□ -1.9
SCFD1-210ENST00000553693 BARD1Q99728 777 aaKnown RBP3.18□□□□□ -1.9
SCFD1-210ENST00000553693 MAP3K3Q99759 626 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 PRRG4Q9BZD6 226 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 TUBB1Q9H4B7 451 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 HEXA-AS1Q9H8Q6 139 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 Q9H8V8 135 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 GNB4Q9HAV0 340 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 GDE1Q9NZC3 331 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 TBC1D29Q9UFV1 150 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 COL16A1Q07092 1604 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-210ENST00000553693 RGS12O14924 1447 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 EEA1Q15075 1411 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 CASKIN1Q8WXD9 1431 aa3.18□□□□□ -1.9
SCFD1-210ENST00000553693 ERVK-7P63135 1459 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 CCDC18Q5T9S5 1454 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 MSH6P52701 1360 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 UBR1Q8IWV7 1749 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 IGHV4-30-2A0A087WSY4 118 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 A0A1W2PPQ1 181 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 hCG_1807616A0A1W2PRN6 198 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 KLLNB2CW77 178 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 GFPT2O94808 682 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 KRTAP1-4P0C5Y4 121 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 CDC25CP30307 473 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 EIF2DP41214 584 aaKnown RBP3.17□□□□□ -1.9
SCFD1-210ENST00000553693 SOX3P41225 446 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 OR3A2P47893 321 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 ZFP36L2P47974 494 aaKnown RBP3.17□□□□□ -1.9
SCFD1-210ENST00000553693 VAMP7P51809 220 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 ZFP36L1Q07352 338 aaKnown RBP3.17□□□□□ -1.9
SCFD1-210ENST00000553693 TRAP1Q12931 704 aaKnown RBP3.17□□□□□ -1.9
SCFD1-210ENST00000553693 CUL3Q13618 768 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 CUL4AQ13619 759 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 TMEM132DQ14C87 1099 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 OR4A47Q6IF82 309 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 ZNF841Q6ZN19 808 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 SLC25A42Q86VD7 318 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 FAM131BQ86XD5 332 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms