RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FIGNL2A6NMB9 653 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 SMAD7O15105 426 aaKnown RBP12.94□□□□□ -0.34
PRPF39-204ENST00000553605 OR1I1O60431 355 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 SERPING1P05155 500 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 CD53P19397 219 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 TRHRP34981 398 aaPredicted RBP12.94□□□□□ -0.34
PRPF39-204ENST00000553605 CDKN2BP42772 138 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 XCR1P46094 333 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 SLC26A5P58743 744 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 USP10Q14694 798 aaKnown RBP12.94□□□□□ -0.34
PRPF39-204ENST00000553605 NDUFA9Q16795 377 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 CCSMST1Q4G0I0 132 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 KIF2BQ8N4N8 673 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 ELP5Q8TE02 316 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 STYXQ8WUJ0 223 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 CTNNBL1Q8WYA6 563 aaPredicted RBP12.94□□□□□ -0.34
PRPF39-204ENST00000553605 SPATA13Q96N96 652 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 QKIQ96PU8 341 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRPF39-204ENST00000553605 TBL1YQ9BQ87 522 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 DDX56Q9NY93 547 aaKnown RBP12.94□□□□□ -0.34
PRPF39-204ENST00000553605 FAM215AQ9Y5M1 114 aa12.94□□□□□ -0.34
PRPF39-204ENST00000553605 KRT87PA6NCN2 255 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 OR51F1A6NGY5 319 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 HACD1B0YJ81 288 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 C1orf105O95561 183 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 APOA4P06727 396 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 TNNT1P13805 278 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 PKMP14618 531 aaKnown RBP12.93□□□□□ -0.34
PRPF39-204ENST00000553605 MSNP26038 577 aaKnown RBP12.93□□□□□ -0.34
PRPF39-204ENST00000553605 PSMB4P28070 264 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 RBL1P28749 1068 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 ADH7P40394 386 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 MLF1P58340 268 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 SNRPNP63162 240 aaKnown RBP12.93□□□□□ -0.34
PRPF39-204ENST00000553605 SPARCL1Q14515 664 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 NSDHLQ15738 373 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 LRRC38Q5VT99 294 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 RTL6Q6ICC9 239 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 PHC2Q8IXK0 858 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 ARMC2Q8NEN0 867 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 CREB3L4Q8TEY5 395 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 SYN2Q92777 582 aaPredicted RBP12.93□□□□□ -0.34
PRPF39-204ENST00000553605 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 TSSK1BQ9BXA7 367 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 C10orf88Q9H8K7 445 aa12.93□□□□□ -0.34
PRPF39-204ENST00000553605 MRPS30Q9NP92 439 aaKnown RBP12.93□□□□□ -0.34
PRPF39-204ENST00000553605 TTC7AQ9ULT0 858 aaPredicted RBP12.93□□□□□ -0.34
PRPF39-204ENST00000553605 IQCF5A8MTL0 148 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 BCKDKO14874 412 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 P2RX6O15547 441 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 TPH1P17752 444 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 FOXN2P32314 431 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 BDKRB1P46663 353 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 GPR85P60893 370 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 ABRAXAS2Q15018 415 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 FILIP1LQ4L180 1135 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 Q5PR19 223 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 PCGF5Q86SE9 256 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 P3H2Q8IVL5 708 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 PLPP5Q8NEB5 264 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 MCOLN3Q8TDD5 553 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 ALS2CR12Q96Q35 445 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 BDH2Q9BUT1 245 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 CARD6Q9BX69 1037 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 PACSIN1Q9BY11 444 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 UTP6Q9NYH9 597 aaKnown RBP12.92□□□□□ -0.34
PRPF39-204ENST00000553605 HCN3Q9P1Z3 774 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 MRFAP1Q9Y605 127 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 NFS1Q9Y697 457 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 DUSP10Q9Y6W6 482 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 DNAJC13O75165 2243 aa12.92□□□□□ -0.34
PRPF39-204ENST00000553605 IGKV1-8A0A0C4DH67 115 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 OR14I1A6ND48 311 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 ARHGEF33A8MVX0 844 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 FCHO1O14526 889 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 NSA2O95478 260 aaKnown RBP12.91□□□□□ -0.34
PRPF39-204ENST00000553605 TACR1P25103 407 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 AOAHP28039 575 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 OR4D2P58180 307 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 ANKRD20A2Q5SQ80 823 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 ANKRD20A1Q5TYW2 823 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 ANKRD20A3Q5VUR7 823 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
PRPF39-204ENST00000553605 PRSS41Q7RTY9 318 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 CXorf67Q86X51 503 aaPredicted RBP12.91□□□□□ -0.34
PRPF39-204ENST00000553605 VWA5B2Q8N398 1253 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 GSDMBQ8TAX9 411 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 LKAAEAR1Q8TD35 194 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 SKA2Q8WVK7 121 aaPredicted RBP12.91□□□□□ -0.34
PRPF39-204ENST00000553605 SLCO2A1Q92959 643 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 LRRC45Q96CN5 670 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 LRRC46Q96FV0 321 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 Q96MF0 132 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 SMC6Q96SB8 1091 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 TTC1Q99614 292 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 ATG10Q9H0Y0 220 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 ANO10Q9NW15 660 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 B4GALT7Q9UBV7 327 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 TRPS1Q9UHF7 1281 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 PCYOX1Q9UHG3 505 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms