RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 THOC5Q13769 683 aaKnown RBP9.41□□□□□ -0.9
ACTN1-208ENST00000553370 ARHGAP19Q14CB8 494 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 KLHL38Q2WGJ6 581 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 CTSL3PQ5NE16 218 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 GARNL3Q5VVW2 1013 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 ZNF470Q6ECI4 717 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 RPUSD3Q6P087 351 aaKnown RBP9.41□□□□□ -0.9
ACTN1-208ENST00000553370 LRRC8BQ6P9F7 803 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 CES3Q6UWW8 571 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 TREML1Q86YW5 311 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 TICAM1Q8IUC6 712 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 MCEMP1Q8IX19 187 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 RNF10Q8N5U6 811 aaKnown RBP9.41□□□□□ -0.9
ACTN1-208ENST00000553370 PPFIBP2Q8ND30 876 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 LPGAT1Q92604 370 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 TCF12Q99081 682 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 MESP1Q9BRJ9 268 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 TUBB6Q9BUF5 446 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 UNKQ9C0B0 810 aaKnown RBP9.41□□□□□ -0.9
ACTN1-208ENST00000553370 TREX1Q9NSU2 369 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 OR5H15A6NDH6 313 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 MYO1CO00159 1063 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 HAT1O14929 419 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 PRICKLE3O43900 615 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-208ENST00000553370 PRAMEF2O60811 474 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 SEC24DO94855 1032 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-208ENST00000553370 MED26O95402 600 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 WDPCPO95876 746 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 STATHP02808 62 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 CELA2AP08217 269 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 ITGAMP11215 1152 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 OGNP20774 298 aaKnown RBP9.4□□□□□ -0.9
ACTN1-208ENST00000553370 WDR4P57081 412 aaKnown RBP9.4□□□□□ -0.9
ACTN1-208ENST00000553370 ABATP80404 500 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 MAT1AQ00266 395 aaKnown RBP9.4□□□□□ -0.9
ACTN1-208ENST00000553370 CUL1Q13616 776 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 SYT16Q17RD7 645 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 PRTGQ2VWP7 1150 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 BTBD16Q32M84 506 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.4□□□□□ -0.9
ACTN1-208ENST00000553370 ATG9BQ674R7 924 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 SP5Q6BEB4 398 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-208ENST00000553370 RPTNQ6XPR3 784 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 GDF7Q7Z4P5 450 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 PAQR7Q86WK9 346 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 PLD3Q8IV08 490 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 PALM2Q8IXS6 379 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 ZCCHC10Q8TBK6 192 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 ZNF669Q96BR6 464 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-208ENST00000553370 MFSD3Q96ES6 412 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 PKP4Q99569 1192 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 ZNF395Q9H8N7 513 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-208ENST00000553370 KCNK13Q9HB14 408 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 HCN3Q9P1Z3 774 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 SOX13Q9UN79 622 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 KLK4Q9Y5K2 254 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 OTOGQ6ZRI0 2925 aa9.4□□□□□ -0.9
ACTN1-208ENST00000553370 ZNF407Q9C0G0 2248 aa9.4□□□□□ -0.91
ACTN1-208ENST00000553370 IGLV3-12A0A075B6K2 115 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 A0A0U1RQJ8 604 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 A0A1W2PPV9 198 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 TTI1O43156 1089 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 ZBTB14O43829 449 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 MATN4O95460 622 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 SLC16A8O95907 504 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 FGGP02679 453 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 RPLP1P05386 114 aaKnown RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 TPSB2P20231 275 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 GRK3P35626 688 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 SLC26A3P40879 764 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 TAS2R50P59544 299 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 YBX1P67809 324 aaKnown RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 CDK16Q00536 496 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 ACTN3Q08043 901 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 DHX34Q14147 1143 aaKnown RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 TRIP13Q15645 432 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 TPSAB1Q15661 275 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 CCNG2Q16589 344 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 TYSND1Q2T9J0 566 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 ACSBG2Q5FVE4 666 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 ZNF766Q5HY98 468 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 KIAA0930Q6ICG6 404 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 NEPROQ6NW34 567 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 MRGPRGQ86SM5 289 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 ZC3H7AQ8IWR0 971 aaKnown RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 FAM98AQ8NCA5 519 aaKnown RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 DNAJB8Q8NHS0 232 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 HAS2Q92819 552 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 BIRC8Q96P09 236 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 TAAR6Q96RI8 345 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 TRIM56Q9BRZ2 755 aaKnown RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 KIFC1Q9BW19 673 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 ZNF700Q9H0M5 742 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 ANKHQ9HCJ1 492 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 CHST11Q9NPF2 352 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 CCDC177Q9NQR7 707 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 INTS10Q9NVR2 710 aaKnown RBP9.39□□□□□ -0.91
ACTN1-208ENST00000553370 STMN3Q9NZ72 180 aa9.39□□□□□ -0.91
ACTN1-208ENST00000553370 ZKSCAN5Q9Y2L8 839 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms