RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 HYKKA2RU49 373 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 ONECUT2O95948 504 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 EIF2S1P05198 315 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 CAPN1P07384 714 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 SLC35G6P0C7Q6 338 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 GFAPP14136 432 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 TCN2P20062 427 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 ITGAXP20702 1163 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 F8A1P23610 371 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 PTPN4P29074 926 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 AHRP35869 848 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 GDF5P43026 501 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 RPS15P62841 145 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 DCDP81605 110 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 CDC20Q12834 499 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 NAA30Q147X3 362 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 HKDC1Q2TB90 917 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 NKAIN1Q4KMZ8 207 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 CATSPEREQ5SY80 951 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 ARHGAP40Q5TG30 622 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 C1orf189Q5VU69 101 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 ATG9BQ674R7 924 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 LCN10Q6JVE6 187 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 METTL2BQ6P1Q9 378 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 PRMT9Q6P2P2 845 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 FAM199XQ6PEV8 388 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 NXPE4Q6UWF7 544 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 SLCO4C1Q6ZQN7 724 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 TTLL10Q6ZVT0 673 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 GPR155Q7Z3F1 870 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 RIBC1Q8N443 379 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 MFSD9Q8NBP5 474 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 EPS8L3Q8TE67 593 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 MRPL57Q9BQC6 102 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 AIF1LQ9BQI0 150 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 CD244Q9BZW8 370 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 PITHD1Q9GZP4 211 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 MRPL46Q9H2W6 279 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 ACTL8Q9H568 366 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 AKIRIN1Q9H9L7 192 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 STARD5Q9NSY2 213 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 OPTCQ9UBM4 332 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 TBK1Q9UHD2 729 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 LHX6Q9UPM6 363 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 RUVBL1Q9Y265 456 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 PADI2Q9Y2J8 665 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 ASB1Q9Y576 335 aa11.17□□□□□ -0.62
TRAFD1-209ENST00000552896 SCN2AQ99250 2005 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 K7EPI3 171 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 TK2O00142 265 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 CLGNO14967 610 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 PRPF4O43172 522 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 CCNT2O60583 730 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 MED26O95402 600 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 RECKO95980 971 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 GSTA1P08263 222 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 CD63P08962 238 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 PIM1P11309 404 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 GSTM2P28161 218 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 SCTRP47872 440 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 AGTR2P50052 363 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 MEF2AQ02078 507 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 PCDH1Q08174 1060 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 FAM53BQ14153 422 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 E2F2Q14209 437 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 NDUFA9Q16795 377 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 FBXO48Q5FWF7 155 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 SYVN1Q86TM6 617 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 ASPGQ86U10 573 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 ENDOVQ8N8Q3 282 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 SNX31Q8N9S9 440 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 CAMKVQ8NCB2 501 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 TM4SF19Q96DZ7 209 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 WDR34Q96EX3 536 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 SEC16BQ96JE7 1060 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 SCYL1Q96KG9 808 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 RUFY1Q96T51 708 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 DRC3Q9H069 523 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 SPNS1Q9H2V7 528 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 WDR54Q9H977 334 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 ZNF358Q9NW07 568 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 GEMIN8Q9NWZ8 242 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 IFT80Q9P2H3 777 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 CPSF2Q9P2I0 782 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 COPG2Q9UBF2 871 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 NDOR1Q9UHB4 597 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 GPN3Q9UHW5 284 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 ZFP69BQ9UJL9 534 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 MRPS18BQ9Y676 258 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 PIEZO2Q9H5I5 2752 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 MED13Q9UHV7 2174 aa11.16□□□□□ -0.62
TRAFD1-209ENST00000552896 SMIM23A6NLE4 172 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 STX16-NPEPL1H3BU86 382 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 STX16O14662 325 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 MAP2K7O14733 419 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 NDUFS4O43181 175 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 OR1F1O43749 312 aa11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 LCMT2O60294 686 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-209ENST00000552896 SMIM24O75264 130 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms