RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 UGT1A4P22310 534 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 PRKACGP22612 351 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 TCF7P36402 384 aaPredicted RBP3.79□□□□□ -1.8
CEP290-206ENST00000552770 MMP12P39900 470 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 RGS7P49802 495 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 CYCSP99999 105 aaKnown RBP3.79□□□□□ -1.8
CEP290-206ENST00000552770 CACNG1Q06432 222 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 SULT2A1Q06520 285 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 EXT1Q16394 746 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 PTGISQ16647 500 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 MTHFSDQ2M296 383 aaKnown RBP3.79□□□□□ -1.8
CEP290-206ENST00000552770 NRARPQ7Z6K4 114 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 SIX6OS1Q8N1H7 587 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 NUP37Q8NFH4 326 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 GOT1L1Q8NHS2 421 aaPredicted RBP3.79□□□□□ -1.8
CEP290-206ENST00000552770 ZNF519Q8TB69 540 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 AFAP1L1Q8TED9 768 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 GRK7Q8WTQ7 553 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 DNASE1L2Q92874 299 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 VMP1Q96GC9 406 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 AK8Q96MA6 479 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 NSMCE3Q96MG7 304 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 PKP2Q99959 881 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 PYGO2Q9BRQ0 406 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 KATNB1Q9BVA0 655 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 FAM129AQ9BZQ8 928 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 SPHK2Q9NRA0 654 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 VPS18Q9P253 973 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 THEGQ9P2T0 379 aa3.79□□□□□ -1.8
CEP290-206ENST00000552770 A0A1W2PPK0 400 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 MEX3AA1L020 520 aaKnown RBP3.78□□□□□ -1.8
CEP290-206ENST00000552770 OOEPA6NGQ2 149 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 ATP6AP2O75787 350 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 ZFYP08048 801 aaPredicted RBP3.78□□□□□ -1.8
CEP290-206ENST00000552770 FAM58BPP0C7Q3 252 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 HLA-FP30511 346 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 MTCP1P56278 107 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 UBASH3AP57075 661 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 TRAP1Q12931 704 aaKnown RBP3.78□□□□□ -1.8
CEP290-206ENST00000552770 TNK1Q13470 666 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 EFTUD2Q15029 972 aaKnown RBP eCLIP3.78□□□□□ -1.8
CEP290-206ENST00000552770 PTPN14Q15678 1187 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 RBBP7Q16576 425 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 SNAI3Q3KNW1 292 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 TAF1BQ53T94 588 aaPredicted RBP3.78□□□□□ -1.8
CEP290-206ENST00000552770 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 TXNRD3NBQ6F5E7 133 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 ATAD1Q8NBU5 361 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 SLC37A3Q8NCC5 494 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 GATAD1Q8WUU5 269 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 NSMAFQ92636 917 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 CORO2AQ92828 525 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 C4orf45Q96LM5 186 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 JAKMIP1Q96N16 626 aaKnown RBP3.78□□□□□ -1.8
CEP290-206ENST00000552770 MAP3K3Q99759 626 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 SLC2A11Q9BYW1 496 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 SDCBP2Q9H190 292 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 SNX25Q9H3E2 840 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 ACTL8Q9H568 366 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 COPS7BQ9H9Q2 264 aaPredicted RBP3.78□□□□□ -1.8
CEP290-206ENST00000552770 DNAJC4Q9NNZ3 241 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 ITGA11Q9UKX5 1188 aa3.78□□□□□ -1.8
CEP290-206ENST00000552770 TRBV5-5A0A0J9YX44 114 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 A0A1W2PR80 420 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 MPTX1A8MV57 137 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 C2CD4DB7Z1M9 353 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 IGHEP01854 428 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 RPL35AP18077 110 aaKnown RBP3.77□□□□□ -1.81
CEP290-206ENST00000552770 TIA1P31483 386 aaKnown RBP eCLIP3.77□□□□□ -1.81
CEP290-206ENST00000552770 CETN2P41208 172 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 TSFMP43897 325 aaKnown RBP3.77□□□□□ -1.81
CEP290-206ENST00000552770 CDX1P47902 265 aaPredicted RBP3.77□□□□□ -1.81
CEP290-206ENST00000552770 LBX1P52954 281 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 XGP55808 180 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 ELAVL2Q12926 359 aaKnown RBP3.77□□□□□ -1.81
CEP290-206ENST00000552770 SGCGQ13326 291 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 NFATC2Q13469 925 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 C2CD6Q53TS8 623 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 ODF2Q5BJF6 829 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 KLHL7Q8IXQ5 586 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 LYG1Q8N1E2 194 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.77□□□□□ -1.81
CEP290-206ENST00000552770 OR10Q1Q8NGQ4 319 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 OCC1Q8TAD7 63 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 GDAP1Q8TB36 358 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 HEXDCQ8WVB3 486 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 P2RX5Q93086 422 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 MR1Q95460 341 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 INTS14Q96SY0 518 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 PIGQQ9BRB3 760 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 CHCHD3Q9NX63 227 aaKnown RBP3.77□□□□□ -1.81
CEP290-206ENST00000552770 NUDT4Q9NZJ9 180 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 PKD2L2Q9NZM6 624 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 PA2G4Q9UQ80 394 aaKnown RBP3.77□□□□□ -1.81
CEP290-206ENST00000552770 MOB4Q9Y3A3 225 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 SMAD5-AS1Q9Y6J3 95 aa3.77□□□□□ -1.81
CEP290-206ENST00000552770 ZFP37Q9Y6Q3 630 aaPredicted RBP3.77□□□□□ -1.81
CEP290-206ENST00000552770 COL5A2P05997 1499 aaPredicted RBP3.76□□□□□ -1.81
CEP290-206ENST00000552770 YDJCA8MPS7 323 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms