RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 STUB1Q9UNE7 303 aa3.72□□□□□ -1.81
LSM6P2-201ENST00000552208 VDAC3Q9Y277 283 aa3.72□□□□□ -1.81
LSM6P2-201ENST00000552208 TAF1P21675 1872 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ASPDHA6ND91 283 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC15A5A6NIM6 579 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 F8WDY8 70 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC28A1O00337 649 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC28A2O43868 658 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 CTSVO60911 334 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 PEX11AO75192 247 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 PIGNO95427 931 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 RAF1P04049 648 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ALDH1B1P30837 517 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 SRD5A2P31213 254 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 CCKBRP32239 447 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 MDH1P40925 334 aaKnown RBP3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 NR4A2P43354 598 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 CLCN4P51793 760 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ARFIP1P53367 373 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 HUNKP57058 714 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 TUBA1BP68363 451 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 LGALS3BPQ08380 585 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 TRAP1Q12931 704 aaKnown RBP3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ABRQ12979 859 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 CEBPEQ15744 281 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ETFDHQ16134 617 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 HLFQ16534 295 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 GPR33Q49SQ1 333 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 CES4AQ5XG92 561 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 MARK2Q7KZI7 788 aaKnown RBP3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 TAF8Q7Z7C8 310 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 RTN4RL2Q86UN3 420 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 CCDC60Q8IWA6 550 aaPredicted RBP3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 STHQ8IWL8 128 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 CCDC63Q8NA47 563 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 GMCL1P1Q8NEA9 526 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 OR2T12Q8NG77 320 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 HAS2Q92819 552 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 TSACCQ96A04 125 aaPredicted RBP3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ESAMQ96AP7 390 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 PHF21BQ96EK2 531 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 RBM41Q96IZ5 413 aaKnown RBP3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ASCL2Q99929 193 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 SPAG8Q99932 426 aaPredicted RBP3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ALKBH7Q9BT30 221 aaPredicted RBP3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 NTMT1Q9BV86 223 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ECT2Q9H8V3 914 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 FKRPQ9H9S5 495 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC35D1Q9NTN3 355 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 ELOVL5Q9NYP7 299 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 MALT1Q9UDY8 824 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 XPO7Q9UIA9 1087 aaKnown RBP3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 SH3GLB1Q9Y371 365 aa3.71□□□□□ -1.82
LSM6P2-201ENST00000552208 LOC101059948A0A1B0GTJ6 334 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 ANKRD61A6NGH8 418 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 M0R296 226 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 PSMD3O43242 534 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 SSX5O60225 188 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 HSF2BPO75031 334 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 PRKRAO75569 313 aaKnown RBP3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 STBD1O95210 358 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 DIRAS3O95661 229 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 IGHV4-39P01824 125 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 IGHV4-31P0DP07 118 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 KRT5P13647 590 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 EPHA2P29317 976 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 MAGEA4P43358 317 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 GAS1P54826 345 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 RPP38P78345 283 aaKnown RBP3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 PMP22Q01453 160 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 PRKCEQ02156 737 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 PPP1R8Q12972 351 aaKnown RBP3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 GAGE5Q13069 117 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 GAGE6Q13070 117 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 LCP2Q13094 533 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 SPP2Q13103 211 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 HERC3Q15034 1050 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 KIF19Q2TAC6 998 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 ASPRV1Q53RT3 343 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 DCAF10Q5QP82 559 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 C20orf194Q5TEA3 1177 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 TTC27Q6P3X3 843 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 OLFM4Q6UX06 510 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 MACC1Q6ZN28 852 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC16A9Q7RTY1 509 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 PPP1R42Q7Z4L9 355 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 CROCCP3Q8IVE0 287 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 TBC1D21Q8IYX1 336 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 EID3Q8N140 333 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 PRSS35Q8N3Z0 413 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 TMEM99Q8N816 258 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 LMNTD1Q8N9Z9 388 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC24A4Q8NFF2 622 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 CCDC110Q8TBZ0 833 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 ZNF473Q8WTR7 871 aaKnown RBP3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 ZNF606Q8WXB4 792 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 SMG7Q92540 1137 aaKnown RBP3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC47A1Q96FL8 570 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 C16orf58Q96GQ5 468 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 VPS39Q96JC1 886 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms