RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CXXC5Q7LFL8 322 aaKnown RBP14.37□□□□□ -0.11
CACNB3-220ENST00000551716 CDC20BQ86Y33 519 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 PLPP5Q8NEB5 264 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 OR5M3Q8NGP4 307 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 SMPDL3AQ92484 453 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 PANX3Q96QZ0 392 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 EBNA1BP2Q99848 306 aaKnown RBP14.37□□□□□ -0.11
CACNB3-220ENST00000551716 SMR3AQ99954 134 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 GPATCH1Q9BRR8 931 aaKnown RBP14.37□□□□□ -0.11
CACNB3-220ENST00000551716 ACAT2Q9BWD1 397 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 C10orf88Q9H8K7 445 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 LRRC40Q9H9A6 602 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 PLSCR2Q9NRY7 297 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
CACNB3-220ENST00000551716 SCN2AQ99250 2005 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 FAM47E-STBD1D6RA91 191 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 PSMD3O43242 534 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 HS6ST1O60243 411 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 GAS8O95995 478 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 RAF1P04049 648 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 CTNNA2P26232 953 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 HSD17B2P37059 387 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 XCR1P46094 333 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 MPP1Q00013 466 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 PRDX1Q06830 199 aaKnown RBP14.36□□□□□ -0.11
CACNB3-220ENST00000551716 TCEAL1Q15170 157 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 PARP6Q2NL67 630 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 SLC25A35Q3KQZ1 300 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 SFT2D3Q587I9 215 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 DARS2Q6PI48 645 aaKnown RBP14.36□□□□□ -0.11
CACNB3-220ENST00000551716 AFTPHQ6ULP2 937 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 PRIMA1Q86XR5 153 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 SULF2Q8IWU5 870 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 WFDC11Q8NEX6 87 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 OR9A4Q8NGU2 314 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 HYOU1Q9Y4L1 999 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 COL6A5A8TX70 2615 aa14.36□□□□□ -0.11
CACNB3-220ENST00000551716 OR51F1A6NGY5 319 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 ZNF839A8K0R7 811 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 KIAA1324LA8MWY0 1029 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-220ENST00000551716 FCHO1O14526 889 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 PEX1O43933 1283 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 AKR1B10O60218 316 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 RBP3P10745 1247 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 ACVR2AP27037 513 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 TPP2P29144 1249 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-220ENST00000551716 HOXC12P31275 282 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 ST13P50502 369 aaKnown RBP14.35□□□□□ -0.11
CACNB3-220ENST00000551716 DLX5P56178 289 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 ABATP80404 500 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 MEF2AQ02078 507 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-220ENST00000551716 KEAP1Q14145 624 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 USP10Q14694 798 aaKnown RBP14.35□□□□□ -0.11
CACNB3-220ENST00000551716 ARHGAP19Q14CB8 494 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 ASTE1Q2TB18 679 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-220ENST00000551716 GXYLT1Q4G148 440 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 FASTKD1Q53R41 847 aaKnown RBP14.35□□□□□ -0.11
CACNB3-220ENST00000551716 EMC4Q5J8M3 183 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 AARS2Q5JTZ9 985 aaKnown RBP14.35□□□□□ -0.11
CACNB3-220ENST00000551716 ZNF468Q5VIY5 522 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-220ENST00000551716 KCTD11Q693B1 232 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 PAMR1Q6UXH9 720 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 MICALCLQ6ZW33 695 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 LRRN4CLQ8ND94 238 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 OR4L1Q8NH43 312 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 ELP5Q8TE02 316 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 CREB3L4Q8TEY5 395 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 LRRC46Q96FV0 321 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 HEMGNQ9BXL5 484 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 NEUROD4Q9HD90 331 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 ANAPC5Q9UJX4 755 aa14.35□□□□□ -0.11
CACNB3-220ENST00000551716 OR14I1A6ND48 311 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 FIGNL2A6NMB9 653 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 A6NNC1 897 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 IQCF5A8MTL0 148 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 MAGEB17A8MXT2 336 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 PRMT5O14744 637 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-220ENST00000551716 BCL6P41182 706 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 ITGA8P53708 1063 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 MLF1P58340 268 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 SLC26A5P58743 744 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 EIF3EP60228 445 aaKnown RBP14.34□□□□□ -0.11
CACNB3-220ENST00000551716 COPS2P61201 443 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 YBX1P67809 324 aaKnown RBP14.34□□□□□ -0.11
CACNB3-220ENST00000551716 ABRAXAS2Q15018 415 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 CCSMST1Q4G0I0 132 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 ANKRD20A4Q4UJ75 823 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 PTRHD1Q6GMV3 140 aaKnown RBP14.34□□□□□ -0.11
CACNB3-220ENST00000551716 ZNF425Q6IV72 752 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 RGS9BPQ6ZS82 235 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 OTOAQ7RTW8 1153 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 LINC00523Q86TU6 105 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 ZNF227Q86WZ6 799 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 ZFP62Q8NB50 900 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-220ENST00000551716 OR9A1PQ8NGU1 263 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 FAM222BQ8WU58 562 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 PCYOX1Q9UHG3 505 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 RIMKLBQ9ULI2 386 aa14.34□□□□□ -0.11
CACNB3-220ENST00000551716 EFR3BQ9Y2G0 817 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms