RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TICAM1Q8IUC6 712 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 MMAAQ8IVH4 418 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 DHX40Q8IX18 779 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NELFCDQ8IXH7 590 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SLC35F3Q8IY50 421 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 STK40Q8N2I9 435 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 BOLLQ8N9W6 283 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF248Q8NDW4 579 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 DQX1Q8TE96 717 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SETD7Q8WTS6 366 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 IRGQQ8WZA9 623 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ARHGEF2Q92974 986 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FAM149B1Q96BN6 582 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 TMA16Q96EY4 203 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 CALML4Q96GE6 196 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ATXN7L3BQ96GX2 97 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ANKRD36BP1Q96IX9 119 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 VCPIP1Q96JH7 1222 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 HSFY1Q96LI6 401 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FEM1AQ9BSK4 669 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 H2AFJQ9BTM1 129 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FRMD8Q9BZ67 464 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 DCLK3Q9C098 648 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 B3GNT4Q9C0J1 378 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 DNAI2Q9GZS0 605 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 BLZF1Q9H2G9 400 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SNX25Q9H3E2 840 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 GHITMQ9H3K2 345 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 CUEDC2Q9H467 287 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 GOLPH3LQ9H4A5 285 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ACTR5Q9H9F9 607 aaPredicted RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF304Q9HCX3 659 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ACP6Q9NPH0 428 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 CNGB3Q9NQW8 809 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 PAPOLBQ9NRJ5 636 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SNTG1Q9NSN8 517 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 SEPT11Q9NVA2 429 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FBXL12Q9NXK8 326 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NLGN3Q9NZ94 848 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 BCCIPQ9P287 314 aaKnown RBP eCLIP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ANKMY1Q9P2S6 941 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 NLKQ9UBE8 527 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 LIMA1Q9UHB6 759 aaKnown RBP2.33□□□□□ -2.04
CPSF6-207ENST00000551516 VPS28Q9UK41 221 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 GPR34Q9UPC5 381 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 EXOC7Q9UPT5 735 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 LAMP3Q9UQV4 416 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF510Q9Y2H8 683 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 FADS3Q9Y5Q0 445 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 DMRT1Q9Y5R6 373 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 C2CD3Q4AC94 2353 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 CCDC168Q8NDH2 2452 aa2.33□□□□□ -2.04
CPSF6-207ENST00000551516 A0A0D9SEW6 157 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TYW5A2RUC4 315 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 C2CD4BA6NLJ0 364 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 LINC01548A6NM66 108 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 MEI4A8MW99 385 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 FOXO6A8MYZ6 492 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 USP17L23D6RBM5 183 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PTGES3LE9PB15 166 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 LMO7DNF2Z398 122 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PRAMEF26H0Y7S4 382 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 RHODO00212 210 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ALOX15BO15296 676 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 YKT6O15498 198 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 B4GAT1O43505 415 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SNAP91O60641 907 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 UGDHO60701 494 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TBL1XO60907 577 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SDC3O75056 442 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CSO75390 466 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 NEBLO76041 1014 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 LUC7L3O95232 432 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ADCY5O95622 1261 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SOD1P00441 154 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TUBB4AP04350 444 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PRKCGP05129 697 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 EIF2S1P05198 315 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PAEPP09466 180 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PCNAP12004 261 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SRCP12931 536 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CDH2P19022 906 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TNNI1P19237 187 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 F8A1P23610 371 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CMA1P23946 247 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ANXA13P27216 316 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CERS1P27544 350 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ADORA2BP29275 332 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CCKBRP32239 447 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CDH5P33151 784 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PTGER1P34995 402 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PPARGP37231 505 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 BUD31P41223 144 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 GPR12P47775 334 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 GABRB2P47870 512 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 GCLMP48507 274 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PTH2RP49190 550 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CXCR3P49682 368 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 DUSP3P51452 185 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ATXN3P54252 364 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms