RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CENPKQ9BS16 269 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 APOOQ9BUR5 198 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 DUSP26Q9BV47 211 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 TRIT1Q9H3H1 467 aaKnown RBP11.07□□□□□ -0.64
RAB5C-208ENST00000551338 CD93Q9NPY3 652 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 WASH6PQ9NQA3 447 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 CUEDC1Q9NWM3 386 aaPredicted RBP11.07□□□□□ -0.64
RAB5C-208ENST00000551338 TAC3Q9UHF0 121 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 ATP6V1HQ9UI12 483 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 ACSL5Q9ULC5 683 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 FZD4Q9ULV1 537 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 PCDHGB4Q9UN71 923 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 MAPRE3Q9UPY8 281 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 ERVK-11Q9UQG0 969 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 KCNK6Q9Y257 313 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 PCDHGB5Q9Y5G0 923 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 MTCH2Q9Y6C9 303 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 PIAS3Q9Y6X2 628 aa11.07□□□□□ -0.64
RAB5C-208ENST00000551338 CHD7Q9P2D1 2997 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 C2CD4DB7Z1M9 353 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 DLGAP1O14490 977 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 GSTA4O15217 222 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 LATO43561 262 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 CPSF4O95639 269 aaKnown RBP11.06□□□□□ -0.64
RAB5C-208ENST00000551338 MT-ND1P03886 318 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 LINGO3P0C6S8 592 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 SMIM18P0DKX4 95 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 EFNA1P20827 205 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-208ENST00000551338 DRD1P21728 446 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 RPL10P27635 214 aaKnown RBP11.06□□□□□ -0.64
RAB5C-208ENST00000551338 PSMB5P28074 263 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 PKLRP30613 574 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 MAT2AP31153 395 aaKnown RBP11.06□□□□□ -0.64
RAB5C-208ENST00000551338 HPCAL1P37235 193 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 PIK3CBP42338 1070 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 CHN2P52757 468 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 MRPS21P82921 87 aaKnown RBP11.06□□□□□ -0.64
RAB5C-208ENST00000551338 ZNF763Q0D2J5 394 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 GK3PQ14409 553 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 ENPP6Q6UWR7 440 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 ZBTB49Q6ZSB9 765 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 COMMD6Q7Z4G1 85 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 C17orf64Q86WR6 236 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 FBXO30Q8TB52 745 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.06□□□□□ -0.64
RAB5C-208ENST00000551338 ASB12Q8WXK4 309 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 SMPDL3AQ92484 453 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 UBE2E3Q969T4 207 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 SH3KBP1Q96B97 665 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 COQ8BQ96D53 544 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
RAB5C-208ENST00000551338 C12orf66Q96MD2 445 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 CAMK1GQ96NX5 476 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 C9orf16Q9BUW7 83 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 ACAT2Q9BWD1 397 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 OSBPL11Q9BXB4 747 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 C1QTNF7Q9BXJ2 289 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 BTBD1Q9H0C5 482 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 OR51B5Q9H339 312 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 OSGEPL1Q9H4B0 414 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 C8orf33Q9H7E9 229 aaPredicted RBP11.06□□□□□ -0.64
RAB5C-208ENST00000551338 MYNNQ9NPC7 610 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 TRPV5Q9NQA5 729 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 PDP2Q9P2J9 529 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 BTNL2Q9UIR0 455 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 CD207Q9UJ71 328 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 SCML1Q9UN30 329 aa11.06□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3DA0A087WVF3 549 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3IA0A087WXS9 549 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3EA0A087X179 549 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3KA0A087X1G2 549 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3FA6NER0 549 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-208ENST00000551338 SHISA7A6NL88 538 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 GABRR3A8MPY1 467 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3LB9A6J9 549 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 PDLIM1O00151 329 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 SAP18O00422 153 aaKnown RBP11.05□□□□□ -0.64
RAB5C-208ENST00000551338 PLOD2O00469 737 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 SLC31A1O15431 190 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 GMNNO75496 209 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 CREG1O75629 220 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 EPN2O95208 641 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 RASAL1O95294 804 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBX6O95947 436 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-208ENST00000551338 LDLRP01130 860 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3HP0C7X1 549 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 RAP2AP10114 183 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 ENGP17813 658 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 HSD17B2P37059 387 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 KIAA1024LP59773 190 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 PHEXP78562 749 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TXNL4AP83876 142 aaKnown RBP11.05□□□□□ -0.64
RAB5C-208ENST00000551338 MYBPC1Q00872 1141 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 CHRNB3Q05901 458 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 PDE7AQ13946 482 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 MAP7Q14244 749 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TMTC4Q5T4D3 741 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3GQ6DHY5 549 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3CQ6IPX1 549 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms