RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 HAT1O14929 419 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 HNRNPRO43390 633 aaKnown RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 LIASO43766 372 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 IPO13O94829 963 aaKnown RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 SLCO2B1O94956 709 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 VAPBO95292 243 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 SYF2O95926 243 aaKnown RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 HPP00738 406 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 APOA4P06727 396 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 HEXBP07686 556 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 STSP08842 583 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ADRA1DP25100 572 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 PSMA3P25788 255 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ELAVL4P26378 380 aaKnown RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 HTR1EP28566 365 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 CYLC1P35663 651 aaPredicted RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 KIR3DL1P43629 444 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ZNF75DP51815 510 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ARSFP54793 590 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 OCA2Q04671 838 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ZNF33BQ06732 778 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 CDH17Q12864 832 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 PCOLCEQ15113 449 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 OASLQ15646 514 aaKnown RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 MEI1Q5TIA1 1274 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 HIBCHQ6NVY1 386 aaPredicted RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 TMEM207Q6UWW9 146 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 LINC00114Q6XXX2 140 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ADCK2Q7Z695 626 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 CTAGE6Q86UF2 777 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ZC3H7AQ8IWR0 971 aaKnown RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 DMRTC2Q8IXT2 367 aaPredicted RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 KBTBD2Q8IY47 623 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 BEST3Q8N1M1 668 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 KIF2BQ8N4N8 673 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 CSNK1A1LQ8N752 337 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 BCORP1Q8N888 145 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 SPC24Q8NBT2 197 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ZCCHC10Q8TBK6 192 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ASZ1Q8WWH4 475 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 NRGNQ92686 78 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 FKBP10Q96AY3 582 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 BIRC8Q96P09 236 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 PKP4Q99569 1192 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 C17orf62Q9BQA9 187 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 FERMT1Q9BQL6 677 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ANP32EQ9BTT0 268 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 SLC26A1Q9H2B4 701 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 CLEC4MQ9H2X3 399 aaPredicted RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 WDR54Q9H977 334 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ZNF282Q9UDV7 671 aaPredicted RBP6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 PCYOX1Q9UHG3 505 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 MKL2Q9ULH7 1088 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 ENTPD4Q9Y227 616 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 AKAP6Q13023 2319 aa6.48□□□□□ -1.37
PRPF40B-214ENST00000551320 HEATR5BQ9P2D3 2071 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 MYOCOSA0A1B0GUC4 107 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 FEZF1A0PJY2 475 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 HEATR9A2RTY3 570 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 NPIPA5E9PKD4 350 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 GOLGA8MH3BSY2 632 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 H7BY64 318 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 LINC01387J3KSC0 135 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 PRMT5O14744 637 aaPredicted RBP6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 FBXO24O75426 580 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 NDUFS3O75489 264 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 KRT38O76015 456 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 ONECUT2O95948 504 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 ERVK-10P10266 1014 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 IL1RNP18510 177 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 COILP38432 576 aaPredicted RBP6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 OLR1P78380 273 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 MEF2AQ02078 507 aaPredicted RBP6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 PCDH1Q08174 1060 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 SKOR2Q2VWA4 1001 aaPredicted RBP6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 PRTGQ2VWP7 1150 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 KLHL38Q2WGJ6 581 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 MINDY4Q4G0A6 757 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 ZC3H12BQ5HYM0 836 aaKnown RBP6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 ANKRD22Q5VYY1 191 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 SPINK14Q6IE38 97 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 RNF44Q7L0R7 432 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 NDUFAF7Q7L592 441 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 OTOAQ7RTW8 1153 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 PAQR7Q86WK9 346 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 HPS6Q86YV9 775 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 TMEM139Q8IV31 216 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 DENND6AQ8IWF6 608 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 PPHLN1Q8NEY8 458 aaKnown RBP6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 OR5T3Q8NGG3 340 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 GIMAP7Q8NHV1 300 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 ADAMTS18Q8TE60 1221 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 NR4A3Q92570 626 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 TSLPQ969D9 159 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 MOCOSQ96EN8 888 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 LURAP1Q96LR2 239 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 PRAP1Q96NZ9 151 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 CARD6Q9BX69 1037 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 VN1R1Q9GZP7 353 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 CHRNA10Q9GZZ6 450 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms