RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 HOXB9P17482 250 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-219ENST00000551242 POLR2CP19387 275 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-219ENST00000551242 NUDT1P36639 197 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 ZXDBP98169 803 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 ASAH1Q13510 395 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 VGLL4Q14135 290 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 CPSF6Q16630 551 aaKnown RBP eCLIP11.84□□□□□ -0.51
ERBB3-219ENST00000551242 TATDN3Q17R31 274 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 TIMM50Q3ZCQ8 353 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 MLIPQ5VWP3 458 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 LRRC66Q68CR7 880 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 LAMTOR1Q6IAA8 161 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 ZNF367Q7RTV3 350 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 LRRTM3Q86VH5 581 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 FBXL6Q8N531 539 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 DNAJB3Q8WWF6 145 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 PEX13Q92968 403 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 IGSF8Q969P0 613 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 EGFL8Q99944 293 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 ABHD16BQ9H3Z7 469 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 ABCC13Q9NSE7 274 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 IMPAD1Q9NX62 359 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 RPS6KA6Q9UK32 745 aa11.84□□□□□ -0.51
ERBB3-219ENST00000551242 POLR2AP24928 1970 aaKnown RBP11.83□□□□□ -0.51
ERBB3-219ENST00000551242 PAPPA2Q9BXP8 1791 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 CASTOR2A6NHX0 329 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 CLIC1O00299 241 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 PLA2G10O15496 165 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 HOXB6P17509 224 aaKnown RBP11.83□□□□□ -0.52
ERBB3-219ENST00000551242 GABRB1P18505 474 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 MC4RP32245 332 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 HTR7P34969 479 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 PRIM2P49643 509 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 ALDH6A1Q02252 535 aaKnown RBP11.83□□□□□ -0.52
ERBB3-219ENST00000551242 SLC35F1Q5T1Q4 408 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 SAXO2Q658L1 398 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 TWF2Q6IBS0 349 aaKnown RBP11.83□□□□□ -0.52
ERBB3-219ENST00000551242 C19orf48Q6RUI8 117 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 PTOV1Q86YD1 416 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 TMC8Q8IU68 726 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 OR4M2Q8NGB6 313 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 ENKURQ8TC29 256 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 CRELD1Q96HD1 420 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 C7orf34Q96L11 122 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 C1orf74Q96LT6 269 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 ZYG11BQ9C0D3 744 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 B3GNT4Q9C0J1 378 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 C12orf4Q9NQ89 552 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 RBPJLQ9UBG7 517 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 MAN2B2Q9Y2E5 1009 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 CLCA3PQ9Y6N3 262 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 A0A1W2PQH9 124 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 SLC28A1O00337 649 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 SHOXO15266 292 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 CHRM5P08912 532 aaPredicted RBP11.83□□□□□ -0.52
ERBB3-219ENST00000551242 CRYBA2P53672 197 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 AP2S1P53680 142 aaPredicted RBP11.83□□□□□ -0.52
ERBB3-219ENST00000551242 CSTF3Q12996 717 aaKnown RBP11.83□□□□□ -0.52
ERBB3-219ENST00000551242 QPRTQ15274 297 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 ZNF621Q6ZSS3 439 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 CBLL1Q75N03 491 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 EIF3MQ7L2H7 374 aaKnown RBP11.83□□□□□ -0.52
ERBB3-219ENST00000551242 SLC51BQ86UW2 128 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 PLCZ1Q86YW0 608 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.83□□□□□ -0.52
ERBB3-219ENST00000551242 TCTE3Q8IZS6 198 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 HASPINQ8TF76 798 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 MAL2Q969L2 176 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 ACPTQ9BZG2 426 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 HHATLQ9HCP6 504 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 RABL2BQ9UNT1 228 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 PCDHGA2Q9Y5H1 932 aa11.83□□□□□ -0.52
ERBB3-219ENST00000551242 TNFRSF11BO00300 401 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 MANBAO00462 879 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 CYP17A1P05093 508 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 RHOQP17081 205 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 GPC1P35052 558 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 RORCP51449 518 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 TRIM71Q2Q1W2 868 aaKnown RBP11.82□□□□□ -0.52
ERBB3-219ENST00000551242 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.82□□□□□ -0.521e-6■■■□□ 16.5
ERBB3-219ENST00000551242 TIGD5Q53EQ6 642 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 MS4A13Q5J8X5 152 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 PDZK1Q5T2W1 519 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 SDHAF4Q5VUM1 108 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 MBOAT1Q6ZNC8 495 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 TSEN54Q7Z6J9 526 aaKnown RBP11.82□□□□□ -0.52
ERBB3-219ENST00000551242 SERPINA11Q86U17 422 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 ESX1Q8N693 406 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 ULK4Q96C45 1275 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 SLC39A13Q96H72 371 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 DIRAS2Q96HU8 199 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 OPALINQ96PE5 141 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 PANX1Q96RD7 426 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 PRDM5Q9NQX1 630 aaPredicted RBP11.82□□□□□ -0.52
ERBB3-219ENST00000551242 CMAHPQ9Y471 501 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 ARIH1Q9Y4X5 557 aaPredicted RBP11.82□□□□□ -0.52
ERBB3-219ENST00000551242 ALG5Q9Y673 324 aa11.82□□□□□ -0.52
ERBB3-219ENST00000551242 FABP12A6NFH5 140 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms