RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MIEF2Q96C03 454 aa12.36□□□□□ -0.43
NPAS3-209ENST00000551008 FBXL8Q96CD0 374 aa12.36□□□□□ -0.43
NPAS3-209ENST00000551008 C19orf60Q96EN9 201 aa12.36□□□□□ -0.43
NPAS3-209ENST00000551008 ERP44Q9BS26 406 aa12.36□□□□□ -0.43
NPAS3-209ENST00000551008 TGIF2Q9GZN2 237 aa12.36□□□□□ -0.43
NPAS3-209ENST00000551008 DRC3Q9H069 523 aa12.36□□□□□ -0.43
NPAS3-209ENST00000551008 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
NPAS3-209ENST00000551008 TRPC4Q9UBN4 977 aa12.36□□□□□ -0.43
NPAS3-209ENST00000551008 C3orf18Q9UK00 162 aa12.36□□□□□ -0.43
NPAS3-209ENST00000551008 LOC102723996A0A087X1L8 192 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 FAM95CA0A1B0GW59 222 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 NPEPPSL1A6NEC2 478 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 FAM187AA6NFU0 413 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 IDSB3KWA1 339 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 CDC7O00311 574 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 IGHEP01854 428 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 RNF224P0DH78 156 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 GNLYP22749 145 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 ITGA3P26006 1051 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 SSTR1P30872 391 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 GMPRP36959 345 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 GPX6P59796 221 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 RPS15AP62244 130 aaKnown RBP12.35□□□□□ -0.43
NPAS3-209ENST00000551008 MEF2AQ02078 507 aaPredicted RBP12.35□□□□□ -0.43
NPAS3-209ENST00000551008 ZDHHC24Q6UX98 284 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 Q6ZS92 163 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 CAPN12Q6ZSI9 719 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 STRA8Q7Z7C7 330 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 CUZD1Q86UP6 607 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 C17orf64Q86WR6 236 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 ZBED8Q8IZ13 594 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 KCT2Q8NC54 265 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 RERGQ96A58 199 aaPredicted RBP12.35□□□□□ -0.43
NPAS3-209ENST00000551008 MOCOSQ96EN8 888 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 MMABQ96EY8 250 aaPredicted RBP12.35□□□□□ -0.43
NPAS3-209ENST00000551008 SARGQ9BW04 601 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 AICDAQ9GZX7 198 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 PCBD2Q9H0N5 130 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 WHRNQ9P202 907 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 ZFATQ9P243 1243 aa12.35□□□□□ -0.43
NPAS3-209ENST00000551008 DOPEY1Q5JWR5 2465 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 IGHV1-45A0A0A0MS14 117 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 OR2W5A6NFC9 320 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 DNAJB6O75190 326 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 KLHL18O94889 574 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 BMP10O95393 424 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 HPP00738 406 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 ACPPP15309 386 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 IL1RNP18510 177 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 AP1S2P56377 157 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 ETF1P62495 437 aaKnown RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 OCA2Q04671 838 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 EEF1A2Q05639 463 aaKnown RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 UBAP2LQ14157 1087 aaKnown RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 PCOLCEQ15113 449 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 C18orf21Q32NC0 220 aaPredicted RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 CATSPEREQ5SY80 951 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 TMEM205Q6UW68 189 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 SYT10Q6XYQ8 523 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 SLC26A11Q86WA9 606 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 GALNT11Q8NCW6 608 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 GABPB2Q8TAK5 448 aaPredicted RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 NEIL2Q969S2 332 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 ALKBH8Q96BT7 664 aaKnown RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 SNRNP40Q96DI7 357 aaKnown RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 BARD1Q99728 777 aaKnown RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 RHOJQ9H4E5 214 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 ZNF160Q9HCG1 818 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 MKKSQ9NPJ1 570 aaPredicted RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 C14orf105Q9NVL8 296 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 ARL15Q9NXU5 204 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 UTP6Q9NYH9 597 aaKnown RBP12.34□□□□□ -0.43
NPAS3-209ENST00000551008 CDC14AQ9UNH5 594 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 B3GNT3Q9Y2A9 372 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
NPAS3-209ENST00000551008 FAM159BA6NKW6 160 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 TCP11X1B4DZS4 312 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 C4orf51C9J302 202 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 NSA2O95478 260 aaKnown RBP12.33□□□□□ -0.44
NPAS3-209ENST00000551008 GUCA1CO95843 209 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 B3GALT4O96024 378 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 ENO2P09104 434 aaPredicted RBP12.33□□□□□ -0.44
NPAS3-209ENST00000551008 CCND1P24385 295 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 HRH2P25021 359 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 SOX11P35716 441 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 EMP2P54851 167 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 MRPL49Q13405 166 aaKnown RBP12.33□□□□□ -0.44
NPAS3-209ENST00000551008 TSNQ15631 228 aaKnown RBP12.33□□□□□ -0.44
NPAS3-209ENST00000551008 FAAH2Q6GMR7 532 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 LANCL3Q6ZV70 420 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 AFAP1L2Q8N4X5 818 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 MFSD9Q8NBP5 474 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 ZCCHC10Q8TBK6 192 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 THAP11Q96EK4 314 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.44
NPAS3-209ENST00000551008 UNKQ9C0B0 810 aaKnown RBP12.33□□□□□ -0.44
NPAS3-209ENST00000551008 VN1R1Q9GZP7 353 aa12.33□□□□□ -0.44
NPAS3-209ENST00000551008 LHPPQ9H008 270 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms