RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 MTCP1P56278 107 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 KLC1Q07866 573 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 TAF10Q12962 218 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 RRS1Q15050 365 aaKnown RBP4.46□□□□□ -1.7
LIMA1-205ENST00000550592 E2F5Q15329 346 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 CTU2Q2VPK5 515 aaKnown RBP4.46□□□□□ -1.7
LIMA1-205ENST00000550592 ZC2HC1CQ53FD0 456 aaPredicted RBP4.46□□□□□ -1.7
LIMA1-205ENST00000550592 LRRC73Q5JTD7 316 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 TXNRD3NBQ6F5E7 133 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 TMEM182Q6ZP80 229 aaPredicted RBP4.46□□□□□ -1.7
LIMA1-205ENST00000550592 DZIP1Q86YF9 867 aaKnown RBP4.46□□□□□ -1.7
LIMA1-205ENST00000550592 MMD2Q8IY49 270 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 LGI2Q8N0V4 545 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 ATAD1Q8NBU5 361 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 OR52N5Q8NH56 324 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 ST6GALNAC6Q969X2 333 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 GPATCH1Q9BRR8 931 aaKnown RBP4.46□□□□□ -1.7
LIMA1-205ENST00000550592 PRRG4Q9BZD6 226 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 MMP28Q9H239 520 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 TLE6Q9H808 572 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 ACEP12821 1306 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 BRCA1P38398 1863 aaKnown RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 CEP290O15078 2479 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 A0A1W2PPW3 197 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 FAM172BPA6NC97 362 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 OOEPA6NGQ2 149 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 C2orf81A6NN90 581 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 H0YAE9 185 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 ATP6V0E1O15342 81 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 SNX3O60493 162 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 RPS6KA5O75582 802 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 PGLSO95336 258 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 SUPT20HL2P0C7V6 817 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 IGHV4-31P0DP07 118 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 CDX1P47902 265 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 VAMP7P51809 220 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 ILF2Q12905 390 aaKnown RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 RBBP5Q15291 538 aaKnown RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 TAZQ16635 292 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 PHKG1Q16816 387 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 UGP2Q16851 508 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 TYSND1Q2T9J0 566 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 LBHQ53QV2 105 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 SUSD4Q5VX71 490 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 ZNF449Q6P9G9 518 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 C15orf39Q6ZRI6 1047 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 LINC00696Q6ZRV3 163 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 IL17RELQ6ZVW7 336 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 PIWIL3Q7Z3Z3 882 aaKnown RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 RTN4RL2Q86UN3 420 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 C4orf19Q8IY42 314 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 EID3Q8N140 333 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 NHLRC2Q8NBF2 726 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 FCAMRQ8WWV6 532 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 ZNF354BQ96LW1 612 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 PARK7Q99497 189 aaKnown RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 URM1Q9BTM9 101 aaKnown RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 BICC1Q9H694 974 aaKnown RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 FLRT3Q9NZU0 649 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 LEF1Q9UJU2 399 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-205ENST00000550592 LIPT1Q9Y234 373 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 LTBP1Q14766 1721 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 KIAA1551Q9HCM1 1747 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 THSD7BQ9C0I4 1608 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 USP54Q70EL1 1684 aa4.45□□□□□ -1.7
LIMA1-205ENST00000550592 CCDC88AQ3V6T2 1871 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 PRAF2O60831 178 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 FCGR3BO75015 233 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 GP1BBP13224 206 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 CDH3P22223 829 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 PSMB4P28070 264 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 HERV-K104P61576 105 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 YWHAHQ04917 246 aaPredicted RBP4.44□□□□□ -1.7
LIMA1-205ENST00000550592 TAF13Q15543 124 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 ANKRD20A4Q4UJ75 823 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 ANKRD20A8PQ5CZ79 823 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 FAM76BQ5HYJ3 339 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 ANKRD20A2Q5SQ80 823 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 ANKRD20A1Q5TYW2 823 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 ANKRD20A3Q5VUR7 823 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 OR4A47Q6IF82 309 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 OTOAQ7RTW8 1153 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 KLHL7Q8IXQ5 586 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 CDK20Q8IZL9 346 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 ZNF383Q8NA42 475 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 NOA1Q8NC60 698 aaKnown RBP4.44□□□□□ -1.7
LIMA1-205ENST00000550592 FIBINQ8TAL6 211 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.44□□□□□ -1.7
LIMA1-205ENST00000550592 TM9SF4Q92544 642 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 EXOC4Q96A65 974 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 NSL1Q96IY1 281 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 PANK2Q9BZ23 570 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 OR2B2Q9GZK3 357 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 ZMYND12Q9H0C1 365 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 SNX25Q9H3E2 840 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 CPVLQ9H3G5 476 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 MINDY3Q9H8M7 445 aa4.44□□□□□ -1.7
LIMA1-205ENST00000550592 ZNF334Q9HCZ1 680 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms