RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	VIT	Q6UXI7	678 aa		3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	TIPARP	Q7Z3E1	657 aa	Known RBP	3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	GBP7	Q8N8V2	638 aa	Predicted RBP	3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	SLC4A11	Q8NBS3	891 aa		3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	NSMAF	Q92636	917 aa		3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	PGM2	Q96G03	612 aa		3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	ADNP	Q9H2P0	1102 aa		3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	RNF121	Q9H920	327 aa		3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	ZNF107	Q9UII5	783 aa	Predicted RBP	3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	NPHP3	Q7Z494	1330 aa		3.58	□□□□□ -1.84
CNOT2-222	ENST00000550155	LRCH4	O75427	683 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	MTRF1	O75570	445 aa	Known RBP	3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	ATP5B	P06576	529 aa	Known RBP	3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	BCL3	P20749	454 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	PKLR	P30613	574 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	ALDH1B1	P30837	517 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	SFTPD	P35247	375 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	CSE1L	P55060	971 aa	Known RBP	3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	RASGEF1B	Q0VAM2	473 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	IL16	Q14005	1332 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	KIAA0141	Q14154	515 aa	Predicted RBP	3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	ALDH1L2	Q3SY69	923 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	BMP2KL	Q5H9B9	411 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	HYI	Q5T013	277 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	ATP1A1-AS1	Q5TC04	95 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	MZT2B	Q6NZ67	158 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	CENPV	Q7Z7K6	275 aa	Predicted RBP	3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	IQCH	Q86VS3	1027 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	ZBED8	Q8IZ13	594 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	POMGNT2	Q8NAT1	580 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	OR4C15	Q8NGM1	316 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	RHOXF1	Q8NHV9	184 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	EVI5L	Q96CN4	794 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	KLHL5	Q96PQ7	755 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	GPR88	Q9GZN0	384 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	IL36A	Q9UHA7	158 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155	ANAPC2	Q9UJX6	822 aa		3.57	□□□□□ -1.84
CNOT2-222	ENST00000550155		A0A1W2PPK0	400 aa		3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	WDHD1	O75717	1129 aa	Predicted RBP	3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	ATP6AP2	O75787	350 aa		3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	NDST2	P52849	883 aa		3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	SNTB1	Q13884	538 aa	Known RBP	3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	CYB5D1	Q6P9G0	228 aa		3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	MAML2	Q8IZL2	1156 aa	Predicted RBP	3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	FGFRL1	Q8N441	504 aa		3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	SPPL2A	Q8TCT8	520 aa		3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	SECISBP2L	Q93073	1101 aa	Known RBP	3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	OTUB1	Q96FW1	271 aa	Predicted RBP	3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	ACTL8	Q9H568	366 aa		3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	TRPV2	Q9Y5S1	764 aa		3.56	□□□□□ -1.84
CNOT2-222	ENST00000550155	PRRC2A	P48634	2157 aa	Known RBP	3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	RNF123	Q5XPI4	1314 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	PDHX	O00330	501 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	AP5Z1	O43299	807 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	DUX4L4	P0CJ87	422 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	HSD17B3	P37058	310 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	LIMK1	P53667	647 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	RALGDS	Q12967	914 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	ALCAM	Q13740	583 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	DUSP5	Q16690	384 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	RNF212	Q495C1	297 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	FAM106A	Q4KMX7	169 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	ARMC4	Q5T2S8	1044 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	OLFML2A	Q68BL7	652 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	PRSS55	Q6UWB4	352 aa	Predicted RBP	3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	BAIAP2L2	Q6UXY1	529 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	IL17REL	Q6ZVW7	336 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	RPLP0P6	Q8NHW5	317 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	TYMSOS	Q8TAI1	123 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	ROBO4	Q8WZ75	1007 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	MUS81	Q96NY9	551 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	RBM24	Q9BX46	236 aa	Known RBP	3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	MORF4L1	Q9UBU8	362 aa		3.55	□□□□□ -1.84
CNOT2-222	ENST00000550155	IGHV3-38	A0A0C4DH36	116 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	hCG_38984	A0A1B0GV85	526 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	ZNF840P	A6NDX5	716 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	ADAM20	O43506	726 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	TLX2	O43763	284 aa	Predicted RBP	3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	SH3BGRL	O75368	114 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	GFPT2	O94808	682 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	SLCO2B1	O94956	709 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	GSR	P00390	522 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	GPR183	P32249	361 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	CLDN15	P56746	228 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	RBPJ	Q06330	500 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	CACNG1	Q06432	222 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	C3AR1	Q16581	482 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	GPR139	Q6DWJ6	353 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	CCDC60	Q8IWA6	550 aa	Predicted RBP	3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	SLC22A15	Q8IZD6	547 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	LRTM2	Q8N967	370 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	POGLUT1	Q8NBL1	392 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	IL12RB2	Q99665	862 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	DNAI2	Q9GZS0	605 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	XAB2	Q9HCS7	855 aa	Known RBP	3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	DNAJC4	Q9NNZ3	241 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	CELA1	Q9UNI1	258 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	VSIG4	Q9Y279	399 aa		3.54	□□□□□ -1.84
CNOT2-222	ENST00000550155	HCFC1	P51610	2035 aa		3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms