RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 EXT1Q16394 746 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 MEP1AQ16819 746 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 NEPROQ6NW34 567 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 H3F3CQ6NXT2 135 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 HORMAD2Q8N7B1 307 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 FAM98AQ8NCA5 519 aaKnown RBP12.83□□□□□ -0.36
TROAP-211ENST00000549891 OR9A4Q8NGU2 314 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 ASB11Q8WXH4 323 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 THAP11Q96EK4 314 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 LURAP1Q96LR2 239 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 UTP23Q9BRU9 249 aaKnown RBP12.83□□□□□ -0.36
TROAP-211ENST00000549891 FAM129AQ9BZQ8 928 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 KCNK13Q9HB14 408 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 TMEM184CQ9NVA4 438 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 SAMD15Q9P1V8 674 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 GALPQ9UBC7 116 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 GUCA1BQ9UMX6 200 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 FBN2P35556 2912 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 DCHS2Q6V1P9 2916 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 KCNE1BA0A087WTH5 132 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 CTAGE9A4FU28 777 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 H7BY64 318 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 GFYI3L273 518 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 CD46P15529 392 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 EEF1DP29692 281 aaKnown RBP12.82□□□□□ -0.36
TROAP-211ENST00000549891 SKIV2L2P42285 1042 aaKnown RBP12.82□□□□□ -0.36
TROAP-211ENST00000549891 XCR1P46094 333 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 PMP22Q01453 160 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 CASC4Q6P4E1 433 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 LANCL3Q6ZV70 420 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 CENPUQ71F23 418 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 PLD3Q8IV08 490 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 BEST3Q8N1M1 668 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
TROAP-211ENST00000549891 TMEM178AQ8NBL3 297 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 CAMKVQ8NCB2 501 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 OR51Q1Q8NH59 317 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 M1APQ8TC57 530 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 KCNJ9Q92806 393 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 PRAP1Q96NZ9 151 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 PCBD2Q9H0N5 130 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 ANKHQ9HCJ1 492 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 GPAMQ9HCL2 828 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 CCDC177Q9NQR7 707 aaPredicted RBP12.82□□□□□ -0.36
TROAP-211ENST00000549891 HOMER3Q9NSC5 361 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 COMMD10Q9Y6G5 202 aa12.82□□□□□ -0.36
TROAP-211ENST00000549891 IGHV3-20A0A0C4DH32 117 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 MAGEB16A2A368 324 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 FAM227AF5H4B4 570 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 CDK2AP1O14519 115 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 SNRPB2P08579 225 aaKnown RBP12.81□□□□□ -0.36
TROAP-211ENST00000549891 IL10P22301 178 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 IMPA1P29218 277 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 GRK3P35626 688 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 BCL6P41182 706 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 EFNA3P52797 238 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 TAS2R50P59544 299 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 ALDH6A1Q02252 535 aaKnown RBP12.81□□□□□ -0.36
TROAP-211ENST00000549891 SRSF11Q05519 484 aaKnown RBP12.81□□□□□ -0.36
TROAP-211ENST00000549891 TUBA3CQ13748 450 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 THOC5Q13769 683 aaKnown RBP12.81□□□□□ -0.36
TROAP-211ENST00000549891 DHX34Q14147 1143 aaKnown RBP12.81□□□□□ -0.36
TROAP-211ENST00000549891 SIX1Q15475 284 aaPredicted RBP12.81□□□□□ -0.36
TROAP-211ENST00000549891 OR1C1Q15619 314 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 ZNF470Q6ECI4 717 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 LRRC8EQ6NSJ5 796 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 TUBA3EQ6PEY2 450 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 UBE2R2Q712K3 238 aaPredicted RBP12.81□□□□□ -0.36
TROAP-211ENST00000549891 ANKRD37Q7Z713 158 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 SPPL2CQ8IUH8 684 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 SLC5A8Q8N695 610 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 PRELID2Q8N945 189 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 MDS2Q8NDY4 140 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 GPR137Q96N19 417 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 MMP25Q9NPA2 562 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 TINAGQ9UJW2 476 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 ZNF835Q9Y2P0 537 aa12.81□□□□□ -0.36
TROAP-211ENST00000549891 POLQO75417 2590 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 ADGRG4Q8IZF6 3080 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 TACC2O95359 2948 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 FAM237BA0A1B0GVD1 139 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 EIF3FO00303 357 aaPredicted RBP12.8□□□□□ -0.36
TROAP-211ENST00000549891 CLDN14O95500 239 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 IL1RNP18510 177 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 CCND1P24385 295 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 SSTR2P30874 369 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 CD96P40200 585 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 TBPL1P62380 186 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 ADORA2A-AS1P86434 159 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 ACTN3Q08043 901 aaPredicted RBP12.8□□□□□ -0.36
TROAP-211ENST00000549891 CUL1Q13616 776 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 C3AR1Q16581 482 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 FCRLBQ6BAA4 426 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 TMEM214Q6NUQ4 689 aaKnown RBP12.8□□□□□ -0.36
TROAP-211ENST00000549891 Q6ZPB1 254 aaPredicted RBP12.8□□□□□ -0.36
TROAP-211ENST00000549891 PRSS41Q7RTY9 318 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 VN1R4Q7Z5H5 301 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 CRLF3Q8IUI8 442 aa12.8□□□□□ -0.36
TROAP-211ENST00000549891 LMNTD2Q8IXW0 634 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms