RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 OR2L3Q8NG85 312 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 GSDMBQ8TAX9 411 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 STT3BQ8TCJ2 826 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 MAGEC3Q8TD91 643 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 BRIX1Q8TDN6 353 aaKnown RBP11.56□□□□□ -0.56
DDX54-206ENST00000549271 CA5BP1Q8WTZ4 195 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 NAPGQ99747 312 aaPredicted RBP11.56□□□□□ -0.56
DDX54-206ENST00000549271 CRB3Q9BUF7 120 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.56□□□□□ -0.56
DDX54-206ENST00000549271 ZNF304Q9HCX3 659 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 CCM2LQ9NUG4 571 aaPredicted RBP11.56□□□□□ -0.56
DDX54-206ENST00000549271 INTS10Q9NVR2 710 aaKnown RBP11.56□□□□□ -0.56
DDX54-206ENST00000549271 ASIC3Q9UHC3 531 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 MED16Q9Y2X0 877 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 MRPS2Q9Y399 296 aaKnown RBP11.56□□□□□ -0.56
DDX54-206ENST00000549271 SAR1BQ9Y6B6 198 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 MAD1L1Q9Y6D9 718 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 HEATR5BQ9P2D3 2071 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 FBN1P35555 2871 aaKnown RBP11.56□□□□□ -0.56
DDX54-206ENST00000549271 HRNRQ86YZ3 2850 aaPredicted RBP11.56□□□□□ -0.56
DDX54-206ENST00000549271 OR2A25A4D2G3 310 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 KRT87PA6NCN2 255 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 FOXO6A8MYZ6 492 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 H3BMM5 538 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 PFDN6O15212 129 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 MED26O95402 600 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 MATN4O95460 622 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 WDPCPO95876 746 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 ZGLP1P0C6A0 271 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 ERGP11308 486 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 FDXRP22570 491 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 ATP5DP30049 168 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 CLCN7P51798 805 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 VSX2P58304 361 aaPredicted RBP11.55□□□□□ -0.56
DDX54-206ENST00000549271 OCA2Q04671 838 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 KLC1Q07866 573 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 DHX9Q08211 1270 aaKnown RBP11.55□□□□□ -0.56
DDX54-206ENST00000549271 THOC5Q13769 683 aaKnown RBP11.55□□□□□ -0.56
DDX54-206ENST00000549271 MUM1Q2TAK8 710 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 PRTGQ2VWP7 1150 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 ACSBG2Q5FVE4 666 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 ZNF470Q6ECI4 717 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 FRMPD2BQ6IN97 320 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 TMEM200AQ86VY9 491 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 KLHL7Q8IXQ5 586 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 SIRT6Q8N6T7 355 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 FAM136AQ96C01 138 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 MVB12AQ96EY5 273 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 GPR137Q96N19 417 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 FOPNLQ96NB1 174 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 DMRTA2Q96SC8 542 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 SLC30A3Q99726 388 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 MIPEPQ99797 713 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 PLAC1Q9HBJ0 212 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 NPDC1Q9NQX5 325 aaPredicted RBP11.55□□□□□ -0.56
DDX54-206ENST00000549271 FBXO6Q9NRD1 293 aaPredicted RBP11.55□□□□□ -0.56
DDX54-206ENST00000549271 C20orf96Q9NUD7 363 aaPredicted RBP11.55□□□□□ -0.56
DDX54-206ENST00000549271 ZNF282Q9UDV7 671 aaPredicted RBP11.55□□□□□ -0.56
DDX54-206ENST00000549271 RUVBL2Q9Y230 463 aaKnown RBP11.55□□□□□ -0.56
DDX54-206ENST00000549271 STAB1Q9NY15 2570 aa11.55□□□□□ -0.56
DDX54-206ENST00000549271 LOC105369274A0A096LPK9 316 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 LOC102723532A0A0G2JNH3 316 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 CTAGE9A4FU28 777 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 ADAM10O14672 748 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 MAP2K7O14733 419 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 TP73O15350 636 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 HAUS5O94927 633 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 BMP10O95393 424 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 ACPPP15309 386 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 CHRM3P20309 590 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 PSMB5P28074 263 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 SLC1A2P43004 574 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 BDKRB1P46663 353 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 RELAQ04206 551 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 FOLH1Q04609 750 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 KRTCAP3Q53RY4 240 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 HSP90AA5PQ58FG0 334 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 FBXO42Q6P3S6 717 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 TAOK1Q7L7X3 1001 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 PCGF5Q86SE9 256 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 PRIMA1Q86XR5 153 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 OR4N4Q8N0Y3 316 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 GIMAP7Q8NHV1 300 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 MIEF2Q96C03 454 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 SDCCAG3Q96C92 435 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 C8orf44Q96CB5 159 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 C10orf90Q96M02 699 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 PWWP2AQ96N64 755 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 EBNA1BP2Q99848 306 aaKnown RBP11.54□□□□□ -0.56
DDX54-206ENST00000549271 ZFYVE21Q9BQ24 234 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 ZC3H7BQ9UGR2 993 aaKnown RBP11.54□□□□□ -0.56
DDX54-206ENST00000549271 C3orf18Q9UK00 162 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 FBXO5Q9UKT4 447 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 CDC14AQ9UNH5 594 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 VPS9D1Q9Y2B5 631 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 MAU2Q9Y6X3 613 aa11.54□□□□□ -0.56
DDX54-206ENST00000549271 NSG1A0A0A6YYJ2 146 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 A0A0J9YVX5 310 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 OR5H15A6NDH6 313 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms