RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RBMX2Q9Y388 322 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 M0QX08 132 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 GREM1O60565 184 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 PRPS2P11908 318 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 RPS3P23396 243 aaKnown RBP eCLIP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 GPR1P46091 355 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 ABHD18Q0P651 414 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 TBC1D25Q3MII6 688 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 LYPLAL1Q5VWZ2 237 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 CPZQ66K79 652 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 TMEM215Q68D42 235 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 TMC5Q6UXY8 1006 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 GPR149Q86SP6 731 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 MEX3DQ86XN8 651 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 HIPK1Q86Z02 1210 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 TCEAL8Q8IYN2 117 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 CENPSQ8N2Z9 138 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 RAB8BQ92930 207 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 PKP4Q99569 1192 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 GORASP2Q9H8Y8 452 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 IMPAD1Q9NX62 359 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 KCNE2Q9Y6J6 123 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 H0YAE9 185 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 NPPAP01160 153 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 C8GP07360 202 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 CCL5P13501 91 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 PRPS1L1P21108 318 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 FEN1P39748 380 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 CREMQ03060 361 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 GAB1Q13480 694 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 DPY19L1Q2PZI1 675 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 FNDC3BQ53EP0 1204 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 OR9Q2Q8NGE9 314 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 OR13F1Q8NGS4 319 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 NFKBIDQ8NI38 313 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 HTRA1Q92743 480 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 TANKQ92844 425 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 USP7Q93009 1102 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF641Q96N77 438 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 SIRT5Q9NXA8 310 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 SH2B3Q9UQQ2 575 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 ANKDD1BA6NHY2 528 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 SOX14O95416 240 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 TAS2R50P59544 299 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 SPDYE7PQ495Y7 208 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 B3GNT8Q7Z7M8 397 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 LEMD2Q8NC56 503 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 PAPD5Q8NDF8 572 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 OR7G3Q8NG95 312 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 GANCQ8TET4 914 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 IRF7Q92985 503 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 BORCS5Q969J3 196 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 CMTM7Q96FZ5 175 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 PAWRQ96IZ0 340 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 IL4I1Q96RQ9 567 aa13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 SMAD5Q99717 465 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 TUBA8Q9NY65 449 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 STOX2Q9P2F5 926 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-209ENST00000548825 SMIM30A4D0T7 59 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 GLOD5A6NK44 160 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF99A8MXY4 864 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 CCNDBP1O95273 360 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 RPS3AP61247 264 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 ISL1P61371 349 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 HSPB3Q12988 150 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 NFE2L1Q14494 772 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 CDKN3Q16667 212 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 SLC39A5Q6ZMH5 540 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 Q6ZNB5 142 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 AADATQ8N5Z0 425 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 ABHD11Q8NFV4 315 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 ZFP90Q8TF47 636 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 FEVQ99581 238 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 YIPF4Q9BSR8 244 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 RNF167Q9H6Y7 350 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 TMEM165Q9HC07 324 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 RLIMQ9NVW2 624 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 TNFRSF11BO00300 401 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 ATG13O75143 517 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 KCNK5O95279 499 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 ADH1AP07327 375 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 TTKP33981 857 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 CTNNB1P35222 781 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 MVKQ03426 396 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 KLHL17Q6TDP4 642 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 LRRC70Q7Z2Q7 622 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 RNF130Q86XS8 419 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 SLC43A3Q8NBI5 491 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 WDR48Q8TAF3 677 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 RAB2BQ8WUD1 216 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 OR4K3Q96R72 315 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 FAM32AQ9Y421 112 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 WASHC1A8K0Z3 465 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 RHOP08100 348 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 DCKP27707 260 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 TBPL1P62380 186 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 ATG9BQ674R7 924 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 WASH2PQ6VEQ5 465 aa13.18□□□□□ -0.3
PRPF40B-209ENST00000548825 USP51Q70EK9 711 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms