RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 LRRN3Q9H3W5 708 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 WDR55Q9H6Y2 383 aaPredicted RBP27.58■■■□□ 2.01
BRF1-213ENST00000548421 ADGRE2Q9UHX3 823 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 SLC28A1O00337 649 aa27.57■■■□□ 2
BRF1-213ENST00000548421 ST6GAL1P15907 406 aa27.57■■■□□ 2
BRF1-213ENST00000548421 SERPINB1P30740 379 aa27.57■■■□□ 2
BRF1-213ENST00000548421 PIK3CBP42338 1070 aa27.57■■■□□ 2
BRF1-213ENST00000548421 SCTRP47872 440 aa27.57■■■□□ 2
BRF1-213ENST00000548421 RPS15AP62244 130 aaKnown RBP27.57■■■□□ 2
BRF1-213ENST00000548421 CCL7P80098 99 aa27.57■■■□□ 2
BRF1-213ENST00000548421 RELAQ04206 551 aa27.57■■■□□ 2
BRF1-213ENST00000548421 CSTF3Q12996 717 aaKnown RBP27.57■■■□□ 2
BRF1-213ENST00000548421 ADNP2Q6IQ32 1131 aa27.57■■■□□ 2
BRF1-213ENST00000548421 ACAD11Q709F0 780 aa27.57■■■□□ 2
BRF1-213ENST00000548421 C19orf47Q8N9M1 422 aaKnown RBP27.57■■■□□ 2
BRF1-213ENST00000548421 ANKRD53Q8N9V6 530 aa27.57■■■□□ 2
BRF1-213ENST00000548421 BRF2Q9HAW0 419 aa27.57■■■□□ 2
BRF1-213ENST00000548421 PRM3Q9NNZ6 103 aa27.57■■■□□ 2
BRF1-213ENST00000548421 RIC8BQ9NVN3 520 aa27.57■■■□□ 2
BRF1-213ENST00000548421 GOLGA8QA0A0J9YX86 632 aa27.57■■■□□ 2
BRF1-213ENST00000548421 GOLGA8OA6NCC3 632 aa27.57■■■□□ 2
BRF1-213ENST00000548421 ANKDD1BA6NHY2 528 aa27.57■■■□□ 2
BRF1-213ENST00000548421 GOLGA8NF8WBI6 632 aa27.57■■■□□ 2
BRF1-213ENST00000548421 FOXE1O00358 373 aaPredicted RBP27.57■■■□□ 2
BRF1-213ENST00000548421 VPS4BO75351 444 aa27.57■■■□□ 2
BRF1-213ENST00000548421 GP1BAP07359 652 aa27.57■■■□□ 2
BRF1-213ENST00000548421 HSD3B1P14060 373 aa27.57■■■□□ 2
BRF1-213ENST00000548421 HSD3B2P26439 372 aa27.57■■■□□ 2
BRF1-213ENST00000548421 GSTM2P28161 218 aa27.57■■■□□ 2
BRF1-213ENST00000548421 BCL6P41182 706 aa27.57■■■□□ 2
BRF1-213ENST00000548421 GBP7Q8N8V2 638 aaPredicted RBP27.57■■■□□ 2
BRF1-213ENST00000548421 SEC16BQ96JE7 1060 aa27.57■■■□□ 2
BRF1-213ENST00000548421 NUDT22Q9BRQ3 303 aa27.57■■■□□ 2
BRF1-213ENST00000548421 TCF7L2Q9NQB0 619 aa27.57■■■□□ 2
BRF1-213ENST00000548421 ARL2BPQ9Y2Y0 163 aa27.57■■■□□ 2
BRF1-213ENST00000548421 ATP6AP2A0A1C7CYW4 349 aa27.56■■■□□ 2
BRF1-213ENST00000548421 A0A1W2PQM1 296 aa27.56■■■□□ 2
BRF1-213ENST00000548421 SLC9B1P1A6NJY1 282 aa27.56■■■□□ 2
BRF1-213ENST00000548421 RGS14O43566 566 aa27.56■■■□□ 2
BRF1-213ENST00000548421 KIF1CO43896 1103 aaKnown RBP27.56■■■□□ 2
BRF1-213ENST00000548421 LCMT2O60294 686 aaKnown RBP27.56■■■□□ 2
BRF1-213ENST00000548421 GDF9O60383 454 aa27.56■■■□□ 2
BRF1-213ENST00000548421 CBFA2T3O75081 653 aa27.56■■■□□ 2
BRF1-213ENST00000548421 ATP6AP2O75787 350 aa27.56■■■□□ 2
BRF1-213ENST00000548421 RASSF9O75901 435 aa27.56■■■□□ 2
BRF1-213ENST00000548421 CPNE6O95741 557 aa27.56■■■□□ 2
BRF1-213ENST00000548421 HOXB3P14651 431 aaPredicted RBP27.56■■■□□ 2
BRF1-213ENST00000548421 GABPB1Q06547 395 aaPredicted RBP27.56■■■□□ 2
BRF1-213ENST00000548421 TERF2Q15554 542 aa27.56■■■□□ 2
BRF1-213ENST00000548421 ZIC1Q15915 447 aa27.56■■■□□ 2
BRF1-213ENST00000548421 CLPPQ16740 277 aaPredicted RBP27.56■■■□□ 2
BRF1-213ENST00000548421 IMPG1Q17R60 797 aa27.56■■■□□ 2
BRF1-213ENST00000548421 RNF175Q8N4F7 328 aa27.56■■■□□ 2
BRF1-213ENST00000548421 OR2T11Q8NH01 316 aa27.56■■■□□ 2
BRF1-213ENST00000548421 ACTRT2Q8TDY3 377 aa27.56■■■□□ 2
BRF1-213ENST00000548421 RILPQ96NA2 401 aa27.56■■■□□ 2
BRF1-213ENST00000548421 OR52B2Q96RD2 323 aa27.56■■■□□ 2
BRF1-213ENST00000548421 DPYSL5Q9BPU6 564 aa27.56■■■□□ 2
BRF1-213ENST00000548421 ACPTQ9BZG2 426 aa27.56■■■□□ 2
BRF1-213ENST00000548421 DMRT3Q9NQL9 472 aa27.56■■■□□ 2
BRF1-213ENST00000548421 KLHL3Q9UH77 587 aa27.56■■■□□ 2
BRF1-213ENST00000548421 PCDHGA4Q9Y5G9 962 aa27.56■■■□□ 2
BRF1-213ENST00000548421 MAGEB17A8MXT2 336 aa27.55■■■□□ 2
BRF1-213ENST00000548421 CASC3O15234 703 aaKnown RBP27.55■■■□□ 2
BRF1-213ENST00000548421 AHRP35869 848 aa27.55■■■□□ 2
BRF1-213ENST00000548421 CACHD1Q5VU97 1274 aa27.55■■■□□ 2
BRF1-213ENST00000548421 TMEM71Q6P5X7 295 aa27.55■■■□□ 2
BRF1-213ENST00000548421 Q6ZSR9 355 aa27.55■■■□□ 2
BRF1-213ENST00000548421 VN1R5Q7Z5H4 357 aa27.55■■■□□ 2
BRF1-213ENST00000548421 MFSD9Q8NBP5 474 aa27.55■■■□□ 2
BRF1-213ENST00000548421 CCDC197Q8NCU1 140 aa27.55■■■□□ 2
BRF1-213ENST00000548421 TUBGCP3Q96CW5 907 aa27.55■■■□□ 2
BRF1-213ENST00000548421 CCDC28BQ9BUN5 200 aa27.55■■■□□ 2
BRF1-213ENST00000548421 TMEM9Q9P0T7 183 aa27.55■■■□□ 2
BRF1-213ENST00000548421 ZFP69BQ9UJL9 534 aa27.55■■■□□ 2
BRF1-213ENST00000548421 PILRAQ9UKJ1 303 aa27.55■■■□□ 2
BRF1-213ENST00000548421 PPT2Q9UMR5 302 aa27.55■■■□□ 2
BRF1-213ENST00000548421 CCL27Q9Y4X3 112 aa27.55■■■□□ 2
BRF1-213ENST00000548421 CTSVO60911 334 aa27.54■■■□□ 2
BRF1-213ENST00000548421 CYP4F3Q08477 520 aa27.54■■■□□ 2
BRF1-213ENST00000548421 STPG1Q5TH74 334 aa27.54■■■□□ 2
BRF1-213ENST00000548421 NXNQ6DKJ4 435 aa27.54■■■□□ 2
BRF1-213ENST00000548421 FBXO42Q6P3S6 717 aa27.54■■■□□ 2
BRF1-213ENST00000548421 LARP4Q71RC2 724 aaKnown RBP eCLIP27.54■■■□□ 2
BRF1-213ENST00000548421 RNF44Q7L0R7 432 aa27.54■■■□□ 2
BRF1-213ENST00000548421 CACNA2D3Q8IZS8 1091 aa27.54■■■□□ 2
BRF1-213ENST00000548421 CEP70Q8NHQ1 597 aa27.54■■■□□ 2
BRF1-213ENST00000548421 TCTN2Q96GX1 697 aa27.54■■■□□ 2
BRF1-213ENST00000548421 CDC6Q99741 560 aa27.54■■■□□ 2
BRF1-213ENST00000548421 ZFYVE21Q9BQ24 234 aa27.54■■■□□ 2
BRF1-213ENST00000548421 SYNDIG1Q9H7V2 258 aa27.54■■■□□ 2
BRF1-213ENST00000548421 AKTIPQ9H8T0 292 aa27.54■■■□□ 2
BRF1-213ENST00000548421 ATXN7L1Q9ULK2 861 aaPredicted RBP27.54■■■□□ 2
BRF1-213ENST00000548421 AP1M2Q9Y6Q5 423 aa27.54■■■□□ 2
BRF1-213ENST00000548421 IGHV5-51A0A0C4DH38 117 aa27.53■■■□□ 2
BRF1-213ENST00000548421 PRAMEF10O60809 474 aa27.53■■■□□ 2
BRF1-213ENST00000548421 ZBTB11O95625 1053 aaPredicted RBP27.53■■■□□ 2
BRF1-213ENST00000548421 RPS13P62277 151 aaKnown RBP27.53■■■□□ 2
BRF1-213ENST00000548421 CYP4F2P78329 520 aa27.53■■■□□ 2
BRF1-213ENST00000548421 HMGCS1Q01581 520 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms