RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 MUS81Q96NY9 551 aa3.15□□□□□ -1.91
CCDC38-204ENST00000546816 CCDC106Q9BWC9 280 aa3.15□□□□□ -1.91
CCDC38-204ENST00000546816 KLHL4Q9C0H6 718 aa3.15□□□□□ -1.91
CCDC38-204ENST00000546816 GSN-AS1Q9NRJ2 163 aa3.15□□□□□ -1.91
CCDC38-204ENST00000546816 A0A087WWV3 80 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 SNX3O60493 162 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 HPP00738 406 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 ATP5BP06576 529 aaKnown RBP3.14□□□□□ -1.91
CCDC38-204ENST00000546816 AADACP22760 399 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 ACTN2P35609 894 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 LMAN1P49257 510 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 LIG4P49917 911 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 FKBP3Q00688 224 aaKnown RBP3.14□□□□□ -1.91
CCDC38-204ENST00000546816 PTPRCAPQ14761 206 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 OR4C11Q6IEV9 310 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 FGFRL1Q8N441 504 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 OR4D10Q8NGI6 311 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 KCNE4Q8WWG9 221 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 ROBO4Q8WZ75 1007 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 PROX1Q92786 737 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 CCDC28BQ9BUN5 200 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 CHMP4AQ9BY43 222 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 PIH1D3Q9NQM4 214 aaKnown RBP3.14□□□□□ -1.91
CCDC38-204ENST00000546816 ANAPC2Q9UJX6 822 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 CELA1Q9UNI1 258 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 SNX8Q9Y5X2 465 aa3.14□□□□□ -1.91
CCDC38-204ENST00000546816 SPATA31D1Q6ZQQ2 1576 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 COL16A1Q07092 1604 aaPredicted RBP3.13□□□□□ -1.91
CCDC38-204ENST00000546816 TRAV24A0A0B4J272 114 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 hCG_1809904A0A1W2PP81 198 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 A0A1W2PPE2 198 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 A0A1W2PR64 198 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 SLC1A7O00341 560 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 TRAFD1O14545 582 aaPredicted RBP3.13□□□□□ -1.91
CCDC38-204ENST00000546816 GSRP00390 522 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 ABCB1P08183 1280 aaPredicted RBP3.13□□□□□ -1.91
CCDC38-204ENST00000546816 PCP11498 1178 aaKnown RBP3.13□□□□□ -1.91
CCDC38-204ENST00000546816 ATP4BP51164 291 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 CCR3P51677 355 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 C3AR1Q16581 482 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 CTR9Q6PD62 1173 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 VITQ6UXI7 678 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 ZBTB49Q6ZSB9 765 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 OR4N5Q8IXE1 308 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 SLC34A3Q8N130 599 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 KLHL30-AS1Q8NEE0 82 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 OR52B6Q8NGF0 335 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 LINC00615Q96LM1 132 aaPredicted RBP3.13□□□□□ -1.91
CCDC38-204ENST00000546816 RAVER2Q9HCJ3 691 aaKnown RBP3.13□□□□□ -1.91
CCDC38-204ENST00000546816 HACD3Q9P035 362 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 MORF4L1Q9UBU8 362 aa3.13□□□□□ -1.91
CCDC38-204ENST00000546816 MAGED1Q9Y5V3 778 aaPredicted RBP3.13□□□□□ -1.91
CCDC38-204ENST00000546816 TCRBV21S2A2A0A5A6 115 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 ZNF354AO60765 605 aaPredicted RBP3.12□□□□□ -1.91
CCDC38-204ENST00000546816 PRDM1O75626 825 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 PCGF2P35227 344 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 NDST2P52849 883 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 NONOQ15233 471 aaKnown RBP eCLIP3.12□□□□□ -1.91
CCDC38-204ENST00000546816 ALDH1L2Q3SY69 923 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 REG3GQ6UW15 175 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 CPEB2Q7Z5Q1 589 aaKnown RBP3.12□□□□□ -1.91
CCDC38-204ENST00000546816 MAML2Q8IZL2 1156 aaPredicted RBP3.12□□□□□ -1.91
CCDC38-204ENST00000546816 GPD1LQ8N335 351 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 Q8N7P7 452 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 TCEANCQ8N8B7 351 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 RTL3Q8N8U3 475 aaKnown RBP3.12□□□□□ -1.91
CCDC38-204ENST00000546816 CSNK1G2-AS1Q8NCQ2 148 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 CHURC1Q8WUH1 139 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 NSMAFQ92636 917 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 OTUB1Q96FW1 271 aaPredicted RBP3.12□□□□□ -1.91
CCDC38-204ENST00000546816 PSMB7Q99436 277 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 NDNQ99608 321 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 ACTL8Q9H568 366 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 TBC1D13Q9NVG8 400 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 NLGN3Q9NZ94 848 aa3.12□□□□□ -1.91
CCDC38-204ENST00000546816 CPSF2Q9P2I0 782 aaKnown RBP3.12□□□□□ -1.91
CCDC38-204ENST00000546816 IGKV6D-21A0A0A0MT36 114 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 EDDM13A0A1B0GTR0 161 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 AP5Z1O43299 807 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 CYTIPO60759 359 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 SAP30O75446 220 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 RPS6KA5O75582 802 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 NR2F1P10589 423 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 KHKP50053 298 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 LIMK1P53667 647 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 NDUFV3P56181 108 aaKnown RBP3.11□□□□□ -1.91
CCDC38-204ENST00000546816 ERVK-16P61578 105 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 DUSP5Q16690 384 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 CYB5D1Q6P9G0 228 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 CENPVQ7Z7K6 275 aaPredicted RBP3.11□□□□□ -1.91
CCDC38-204ENST00000546816 RNF130Q86XS8 419 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 SLC22A15Q8IZD6 547 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 RYBPQ8N488 228 aaPredicted RBP3.11□□□□□ -1.91
CCDC38-204ENST00000546816 ANKRD13CQ8N6S4 541 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 GBP7Q8N8V2 638 aaPredicted RBP3.11□□□□□ -1.91
CCDC38-204ENST00000546816 SPPL2AQ8TCT8 520 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 TSACCQ96A04 125 aaPredicted RBP3.11□□□□□ -1.91
CCDC38-204ENST00000546816 BTBD9Q96Q07 612 aa3.11□□□□□ -1.91
CCDC38-204ENST00000546816 SDCBP2Q9H190 292 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms