RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CLIP3Q96DZ5 547 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 TM4SF19Q96DZ7 209 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 NDC1Q9BTX1 674 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 C1QTNF3Q9BXJ4 246 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 DPH1Q9BZG8 443 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 CENPHQ9H3R5 247 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 COPG2Q9UBF2 871 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 PCTPQ9UKL6 214 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 SRPK3Q9UPE1 567 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 PLLPQ9Y342 182 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 ANGPTL3Q9Y5C1 460 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 P2RX6O15547 441 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 OR1F1O43749 312 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 SPAG7O75391 227 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 WFS1O76024 890 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 RPS17P08708 135 aaKnown RBP19.54■□□□□ 0.72
HMGA2-211ENST00000545998 CD22P20273 847 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 PIK3CGP48736 1102 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 GPS2Q13227 327 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 CHIT1Q13231 466 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 DOC2AQ14183 400 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 SLBPQ14493 270 aaKnown RBP eCLIP19.54■□□□□ 0.72
HMGA2-211ENST00000545998 YOD1Q5VVQ6 348 aaPredicted RBP19.54■□□□□ 0.72
HMGA2-211ENST00000545998 SLC22A9Q8IVM8 553 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 CACNA2D3Q8IZS8 1091 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 ARHGEF39Q8N4T4 335 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 TBC1D19Q8N5T2 526 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 ESX1Q8N693 406 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 TTC29Q8NA56 475 aaPredicted RBP19.54■□□□□ 0.72
HMGA2-211ENST00000545998 PTCD3Q96EY7 689 aaKnown RBP19.54■□□□□ 0.72
HMGA2-211ENST00000545998 SLC7A5P2Q9GIP4 190 aa19.54■□□□□ 0.72
HMGA2-211ENST00000545998 RUVBL1Q9Y265 456 aaKnown RBP19.54■□□□□ 0.72
HMGA2-211ENST00000545998 TXNDC9O14530 226 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 H2AFYO75367 372 aaKnown RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 KATNA1O75449 491 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 CXCR2P25025 360 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 AHRP35869 848 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 PRKAA2P54646 552 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ARSFP54793 590 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 HERVK_113P63132 956 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 IRF8Q02556 426 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 COL9A2Q14055 689 aaPredicted RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ZYG11AQ6WRX3 759 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 EXOC3L1Q86VI1 746 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 DSELQ8IZU8 1212 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ANKRD53Q8N9V6 530 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 RDH11Q8TC12 318 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 NSUN5Q96P11 429 aaKnown RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 EFCAB11Q9BUY7 163 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ERVK-6Q9BXR3 956 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 PITHD1Q9GZP4 211 aaPredicted RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 IQCGQ9H095 443 aaKnown RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 NT5DC2Q9H857 520 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 AKIRIN1Q9H9L7 192 aaPredicted RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 CUTCQ9NTM9 273 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 DHCR7Q9UBM7 475 aaKnown RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ZFP69BQ9UJL9 534 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 PADI1Q9ULC6 663 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 HYKKA2RU49 373 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 MEN1O00255 615 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 TYROBPO43914 113 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 MED26O95402 600 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 MYZAPP0CAP1 466 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 MYL2P10916 166 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 STAT5AP42229 794 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ATP1A2P50993 1020 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 EMP3P54852 163 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ABHD18Q0P651 414 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 FAM214AQ32MH5 1076 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ZNF678Q5SXM1 525 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ZNF385CQ66K41 422 aaPredicted RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 TMIGD1Q6UXZ0 262 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ZNF517Q6ZMY9 492 aaPredicted RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ASPGQ86U10 573 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 KRT78Q8N1N4 520 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 CAMKVQ8NCB2 501 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ZNF483Q8TF39 744 aaPredicted RBP19.53■□□□□ 0.72
HMGA2-211ENST00000545998 SLC13A3Q8WWT9 602 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 C10orf90Q96M02 699 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 GBP5Q96PP8 586 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 TMEM237Q96Q45 408 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 RUFY1Q96T51 708 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 IPPKQ9H8X2 491 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 ZBTB26Q9HCK0 441 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 LHX9Q9NQ69 397 aa19.53■□□□□ 0.72
HMGA2-211ENST00000545998 PKD1L2Q7Z442 2459 aa19.52■□□□□ 0.72
HMGA2-211ENST00000545998 RRP8O43159 456 aaKnown RBP19.52■□□□□ 0.71
HMGA2-211ENST00000545998 STATHP02808 62 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 CCNYL3P0C7X3 344 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 IMPDH1P20839 514 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 LAPTM5Q13571 262 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 RBBP5Q15291 538 aaKnown RBP19.52■□□□□ 0.71
HMGA2-211ENST00000545998 TTLL10Q6ZVT0 673 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 RPS27LQ71UM5 84 aaKnown RBP19.52■□□□□ 0.71
HMGA2-211ENST00000545998 CCDC63Q8NA47 563 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 PROKR1Q8TCW9 393 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 TCP10LQ8TDR4 215 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 CCDC126Q96EE4 140 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 L3HYPDHQ96EM0 354 aa19.52■□□□□ 0.71
HMGA2-211ENST00000545998 DCBLD2Q96PD2 775 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms