RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 A0A1W2PQM1 296 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 URADA6NGE7 173 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 RSL1D1O76021 490 aaKnown RBP15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 SLC35G6P0C7Q6 338 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 DRD4P21917 467 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 VARSP26640 1264 aaKnown RBP15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 CCKBRP32239 447 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 TSFMP43897 325 aaKnown RBP15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 CCR10P46092 362 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 EMP3P54852 163 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 CCL7P80098 99 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 MAD2L1Q13257 205 aaPredicted RBP15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 CUL3Q13618 768 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 AMZ1Q400G9 498 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 TMEM35AQ53FP2 167 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 TCTE1Q5JU00 501 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 CACHD1Q5VU97 1274 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 FCRL6Q6DN72 434 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 ATG14Q6ZNE5 492 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 ARHGAP22Q7Z5H3 698 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 BPHLQ86WA6 291 aaPredicted RBP15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 Q8N9G6 341 aaPredicted RBP15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 SRFBP1Q8NEF9 429 aaKnown RBP15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 ACTRT2Q8TDY3 377 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 MOCOSQ96EN8 888 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 CMTM7Q96FZ5 175 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 MAP3K3Q99759 626 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 CCDC28BQ9BUN5 200 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 ZNF395Q9H8N7 513 aaPredicted RBP15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 PNPOQ9NVS9 261 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 PILRAQ9UKJ1 303 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 TMED5Q9Y3A6 229 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 COL27A1Q8IZC6 1860 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 A0A1B0GTL3 188 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 ZSCAN9O15535 394 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 RASSF9O75901 435 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 SERPINA6P08185 405 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 ST6GAL1P15907 406 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 NELFEP18615 380 aaKnown RBP15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 PTX3P26022 381 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 ARL4DP49703 201 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 FOXA1P55317 472 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 GFERP55789 205 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 TGM3Q08188 693 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 GKAP1Q5VSY0 366 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 YOD1Q5VVQ6 348 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 METTL21CQ5VZV1 264 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 EPGNQ6UW88 154 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 ACAD11Q709F0 780 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 FAM9CQ8IZT9 166 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 D2HGDHQ8N465 521 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 CAMKVQ8NCB2 501 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 OR8K5Q8NH50 307 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 ZNF473Q8WTR7 871 aaKnown RBP15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 RERGQ96A58 199 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 PPP3R2Q96LZ3 170 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 ZNF285Q96NJ3 590 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 OR2A5Q96R48 311 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 NRTNQ99748 197 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 FANCEQ9HB96 536 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 ACSS2Q9NR19 701 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 SIRT5Q9NXA8 310 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 AHSPQ9NZD4 102 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 ZNF490Q9ULM2 529 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 PLCL2Q9UPR0 1127 aa15.34■□□□□ 0.05
PRPF40A-212ENST00000545856 ZNF195O14628 629 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 HAT1O14929 419 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 OR1F1O43749 312 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 SNX3O60493 162 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 DKK1O94907 266 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 MLLT3P42568 568 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 LSSP48449 732 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 SEC24CP53992 1094 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 STXBP1P61764 594 aaKnown RBP15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 SKP1P63208 163 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 ACY1Q03154 408 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 CFHR1Q03591 330 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 RGS1Q08116 209 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 TRIP6Q15654 476 aaKnown RBP15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 ADPRMQ3LIE5 342 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 SPIN4Q56A73 249 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 NKAIN2Q5VXU1 208 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 CLEC6AQ6EIG7 209 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 OGFOD2Q6N063 350 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 RBM44Q6ZP01 1051 aaKnown RBP15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 FAM92BQ6ZTR7 304 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 CHSY3Q70JA7 882 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 SPATA21Q7Z572 469 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 SLITRK4Q8IW52 837 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 DCBLD1Q8N8Z6 715 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 CEP70Q8NHQ1 597 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 HUS1BQ8NHY5 278 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 NT5CQ8TCD5 201 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 KCNA7Q96RP8 456 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 CCT8L2Q96SF2 557 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 SHCBP1LQ9BZQ2 653 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 TNFRSF12AQ9NP84 129 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 DMRT3Q9NQL9 472 aa15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 AKAP7Q9P0M2 348 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-212ENST00000545856 MARCOQ9UEW3 520 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms