RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CXCR4P61073 352 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 KCNJ10P78508 379 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.26■□□□□ 0.03
LDLR-204ENST00000545707 ZNF852Q6ZMS4 543 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 Q6ZVU0 165 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 TSEN54Q7Z6J9 526 aaKnown RBP15.26■□□□□ 0.03
LDLR-204ENST00000545707 THOC6Q86W42 341 aaKnown RBP15.26■□□□□ 0.03
LDLR-204ENST00000545707 PLD3Q8IV08 490 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 FAM9CQ8IZT9 166 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 TCAIMQ8N3R3 496 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 SYNPOQ8N3V7 929 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 RAET1EQ8TD07 263 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 SAMD11Q96NU1 681 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 RLIMQ9NVW2 624 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 SH3BP4Q9P0V3 963 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 SRRDQ9UH36 339 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 LSM7Q9UK45 103 aaKnown RBP15.26■□□□□ 0.03
LDLR-204ENST00000545707 TRIM17Q9Y577 477 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 PCDHB11Q9Y5F2 797 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 OR2A25A4D2G3 310 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 GCM2O75603 506 aaPredicted RBP15.25■□□□□ 0.03
LDLR-204ENST00000545707 LATS1O95835 1130 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 SOD2P04179 222 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 ITGA1P56199 1179 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 SFSWAPQ12872 951 aaKnown RBP15.25■□□□□ 0.03
LDLR-204ENST00000545707 SOWAHCQ53LP3 525 aaPredicted RBP15.25■□□□□ 0.03
LDLR-204ENST00000545707 CDKL4Q5MAI5 379 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 TPGS2Q68CL5 300 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 ASTLQ6HA08 431 aaPredicted RBP15.25■□□□□ 0.03
LDLR-204ENST00000545707 FAHD1Q6P587 224 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 C22orf39Q6P5X5 142 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 PRSS48Q7RTY5 328 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 FAM124AQ86V42 546 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 PSMA8Q8TAA3 256 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 FIBINQ8TAL6 211 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 WDR20Q8TBZ3 569 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 SPPL2AQ8TCT8 520 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 ECHDC3Q96DC8 303 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 ZHX1-C8orf76Q96EF9 292 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 RNF167Q9H6Y7 350 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 TMEM221A6NGB7 291 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 ARHGEF33A8MVX0 844 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 EFCAB9A8MZ26 197 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 C9P02748 559 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 ANXA4P09525 319 aaPredicted RBP15.25■□□□□ 0.03
LDLR-204ENST00000545707 TGM1P22735 817 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 SLC19A1P41440 591 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 RAE1P78406 368 aaKnown RBP15.25■□□□□ 0.03
LDLR-204ENST00000545707 POM121L1PQ3SYA9 428 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 COX20Q5RI15 118 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 Q6ZVL8 140 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 GPR155Q7Z3F1 870 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 OR4K1Q8NGD4 311 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 OR8J2Q8NGG1 315 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 S100ZQ8WXG8 99 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 OR4K3Q96R72 315 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 FEVQ99581 238 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 FBXO8Q9NRD0 319 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 MRPL17Q9NRX2 175 aaKnown RBP15.25■□□□□ 0.03
LDLR-204ENST00000545707 ERVW-1Q9UQF0 538 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 HSPE1-MOB4S4R3N1 261 aa15.25■□□□□ 0.03
LDLR-204ENST00000545707 SCN5AQ14524 2016 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 SUV39H1O43463 412 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 SGTAO43765 313 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 INHAP05111 366 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 SLC13A2Q13183 592 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 TSTA3Q13630 321 aaPredicted RBP15.24■□□□□ 0.03
LDLR-204ENST00000545707 CARTPTQ16568 116 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 PROX2Q3B8N5 592 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 MPPE1Q53F39 396 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 CPTPQ5TA50 214 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 HSD11B1LQ7Z5J1 315 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 SLC22A16Q86VW1 577 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 SVOPQ8N4V2 548 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 TSEN34Q9BSV6 310 aaKnown RBP15.24■□□□□ 0.03
LDLR-204ENST00000545707 COPS4Q9BT78 406 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 TMEM121BQ9BXQ6 578 aaPredicted RBP15.24■□□□□ 0.03
LDLR-204ENST00000545707 SGK2Q9HBY8 427 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 MYOFQ9NZM1 2061 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 AOC2O75106 756 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 ETV3P41162 512 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 BDKRB1P46663 353 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 PPP3CCP48454 512 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 SERPINB10P48595 397 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 IDH2P48735 452 aaKnown RBP15.24■□□□□ 0.03
LDLR-204ENST00000545707 CLK1P49759 484 aaKnown RBP15.24■□□□□ 0.03
LDLR-204ENST00000545707 RGNQ15493 299 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 ERICH5Q6P6B1 374 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 P3H2Q8IVL5 708 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 CCDC103Q8IW40 242 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 FAM217AQ8IXS0 508 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 PGBD3Q8N328 593 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 FCRL1Q96LA6 429 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 MCCC1Q96RQ3 725 aaPredicted RBP15.24■□□□□ 0.03
LDLR-204ENST00000545707 DCSTAMPQ9H295 470 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 DSN1Q9H410 356 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 EPS8L2Q9H6S3 715 aa15.24■□□□□ 0.03
LDLR-204ENST00000545707 SPATA6Q9NWH7 488 aaPredicted RBP15.24■□□□□ 0.03
LDLR-204ENST00000545707 FAM120CQ9NX05 1096 aaKnown RBP15.24■□□□□ 0.03
LDLR-204ENST00000545707 SLC6A14Q9UN76 642 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms