RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 SLC2A13Q96QE2 648 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 TMEM209Q96SK2 561 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 RIT2Q99578 217 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 PAAF1Q9BRP4 392 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 NTPCRQ9BSD7 190 aaKnown RBP4.47□□□□□ -1.69
CNGA1-209ENST00000544810 MCMBPQ9BTE3 642 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 ACE2Q9BYF1 805 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-209ENST00000544810 TMEM168Q9H0V1 697 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 ADNPQ9H2P0 1102 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 TMEM45AQ9NWC5 275 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 NSMCE4AQ9NXX6 385 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 GTSE1Q9NYZ3 720 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 GLTPQ9NZD2 209 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 ATP6V1HQ9UI12 483 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 TMEFF2Q9UIK5 374 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-209ENST00000544810 ERVW-1Q9UQF0 538 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 BTBD3Q9Y2F9 522 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 TPRKBQ9Y3C4 175 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 KLF2Q9Y5W3 355 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-209ENST00000544810 BACE2Q9Y5Z0 518 aa4.47□□□□□ -1.69
CNGA1-209ENST00000544810 A0A096LPK6 155 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 TARM1B6A8C7 271 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 NME4O00746 187 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 TOR1AO14656 332 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 ARPC2O15144 300 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 ST8SIA5O15466 376 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 ZNF254O75437 659 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 WISP1O95388 367 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 MATN4O95460 622 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 F9P00740 461 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 C4BPAP04003 597 aaKnown RBP4.46□□□□□ -1.69
CNGA1-209ENST00000544810 HMGN1P05114 100 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 CHRNGP07510 517 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 LCP1P13796 627 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 GJA1P17302 382 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 GRIA1P42261 906 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 GZMKP49863 264 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 EPHA5P54756 1037 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 EEFSECP57772 596 aaKnown RBP4.46□□□□□ -1.69
CNGA1-209ENST00000544810 EMX1Q04741 257 aaPredicted RBP4.46□□□□□ -1.69
CNGA1-209ENST00000544810 POU5F1BQ06416 359 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 FAPQ12884 760 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 RIN1Q13671 783 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 NFE2L1Q14494 772 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 TEAD2Q15562 447 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 TRIP6Q15654 476 aaKnown RBP4.46□□□□□ -1.69
CNGA1-209ENST00000544810 TBRG1Q3YBR2 411 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 Q5BKY6 102 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 TPRG1LQ5T0D9 272 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 SLC23A3Q6PIS1 610 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 PCSK4Q6UW60 755 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 SCARA5Q6ZMJ2 495 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 PM20D2Q8IYS1 436 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 LINC00518Q8N0U6 118 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 TMEM151AQ8N4L1 468 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 ARHGEF39Q8N4T4 335 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 PARP16Q8N5Y8 322 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 ARFGAP1Q8N6T3 406 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 PNPLA1Q8N8W4 532 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 FNDC5Q8NAU1 212 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 TTLQ8NG68 377 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 POMGNT1Q8WZA1 660 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 ZHX1-C8orf76Q96EF9 292 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 PDXPQ96GD0 296 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 MARK4Q96L34 752 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 OPALINQ96PE5 141 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 RNF157Q96PX1 679 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 LXNQ9BS40 222 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 GTPBP2Q9BX10 602 aaKnown RBP4.46□□□□□ -1.69
CNGA1-209ENST00000544810 DGCR6LQ9BY27 220 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 UGT2B28Q9BY64 529 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 NUAK2Q9H093 628 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 LHX5Q9H2C1 402 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 MINDY3Q9H8M7 445 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 FAM118AQ9NWS6 357 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 GFOD1Q9NXC2 390 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 MRPL39Q9NYK5 338 aaKnown RBP4.46□□□□□ -1.69
CNGA1-209ENST00000544810 TBX20Q9UMR3 447 aa4.46□□□□□ -1.69
CNGA1-209ENST00000544810 PCM1Q15154 2024 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 TMEM150BA6NC51 233 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 TISP43B9A030 160 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 ATP6V1G2-DDX39BF2Z307 99 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 UPK1AO00322 258 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 PRRG1O14668 218 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 TMPRSS2O15393 492 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 B4GAT1O43505 415 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 SERPINI2O75830 405 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 STBD1O95210 358 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 WDPCPO95876 746 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 NPPAP01160 153 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 HLA-DRAP01903 254 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 C1QBP02746 253 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 FTH1P02794 183 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 ALPPP05187 535 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 POLBP06746 335 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 RPS17P08708 135 aaKnown RBP4.46□□□□□ -1.7
CNGA1-209ENST00000544810 ITGAMP11215 1152 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 ATF6P18850 670 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 HTR1EP28566 365 aa4.46□□□□□ -1.7
CNGA1-209ENST00000544810 HNF4AP41235 474 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms