RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 HOXD12P35452 270 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 CPOXP36551 454 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 GRIA3P42263 894 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 SIM2Q14190 667 aaPredicted RBP29.18■■■□□ 2.26
CCM2-219ENST00000544363 SPIN4Q56A73 249 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 OOSP2Q86WS3 158 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 PLD3Q8IV08 490 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 TTLQ8NG68 377 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 RCN3Q96D15 328 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 SLC45A3Q96JT2 553 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 MRPL1Q9BYD6 325 aaKnown RBP29.18■■■□□ 2.26
CCM2-219ENST00000544363 LDHAL6BQ9BYZ2 381 aaPredicted RBP29.18■■■□□ 2.26
CCM2-219ENST00000544363 TMEM131Q92545 1883 aa29.18■■■□□ 2.26
CCM2-219ENST00000544363 DNAH14Q0VDD8 3507 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 CACNA1EQ15878 2313 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 NR5A2O00482 541 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 AIM2O14862 343 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 HAT1O14929 419 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 FKBP9O95302 570 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 JAK1P23458 1154 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 ZFP36L2P47974 494 aaKnown RBP29.17■■■□□ 2.26
CCM2-219ENST00000544363 KCNJ2P63252 427 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 BIRC2Q13490 618 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 PTGR1Q14914 329 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 SLC5A12Q1EHB4 618 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 DUOXA1Q1HG43 343 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 C14orf28Q4W4Y0 310 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 FAM9CQ8IZT9 166 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 TBC1D19Q8N5T2 526 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 TSPEARQ8WU66 669 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 OR51B5Q9H339 312 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 EFCAB1Q9HAE3 211 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 KLHL20Q9Y2M5 609 aa29.17■■■□□ 2.26
CCM2-219ENST00000544363 SNRNP200O75643 2136 aaKnown RBP29.17■■■□□ 2.26
CCM2-219ENST00000544363 FAM234BA2RU67 622 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 OR5K3A6NET4 321 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 NRP2O60462 931 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 MYO1DO94832 1006 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 NQO1P15559 274 aaKnown RBP29.16■■■□□ 2.26
CCM2-219ENST00000544363 IL12AP29459 219 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 DPP6P42658 865 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 C6orf132Q5T0Z8 1188 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 SPESP1Q6UW49 350 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 TRIM73Q86UV7 250 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 PAQR7Q86WK9 346 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 C1orf52Q8N6N3 182 aaKnown RBP29.16■■■□□ 2.26
CCM2-219ENST00000544363 BAIAP2L1Q9UHR4 511 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 USP34Q70CQ2 3546 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 LILRA5A6NI73 299 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 C9JVG2 144 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 TNFSF14O43557 240 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 TBX6O95947 436 aaPredicted RBP29.16■■■□□ 2.26
CCM2-219ENST00000544363 SDC1P18827 310 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 POLR2JP52435 117 aaKnown RBP29.16■■■□□ 2.26
CCM2-219ENST00000544363 CYP4F2P78329 520 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 RCAN2Q14206 197 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 DNAL1Q4LDG9 190 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 RABEPKQ7Z6M1 372 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 MS4A8Q9BY19 250 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 CADM1Q9BY67 442 aaKnown RBP29.16■■■□□ 2.26
CCM2-219ENST00000544363 SIRT5Q9NXA8 310 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 PCDHGA2Q9Y5H1 932 aa29.16■■■□□ 2.26
CCM2-219ENST00000544363 FBP2O00757 339 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 GSC2O15499 205 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 GSTM2P28161 218 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 BCL6P41182 706 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 NUDT2P50583 147 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 KCNK10P57789 538 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 SLC25A3Q00325 362 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 MMEL1Q495T6 779 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 KYQ8NBH2 561 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 CEP76Q8TAP6 659 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 SPDL1Q96EA4 605 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 SLC38A3Q99624 504 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 NPAS2Q99743 824 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 DPY30Q9C005 99 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 SLC52A3Q9NQ40 469 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 PI4KAP42356 2102 aa29.15■■■□□ 2.26
CCM2-219ENST00000544363 A0A1B0GTQ1 180 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 BBIP1A8MTZ0 92 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 ZW10O43264 779 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 CLEC3AO75596 197 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 UBXN7O94888 489 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 CFIP05156 583 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 GIMD1P0DJR0 217 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 TYRP1P17643 537 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 CAPN3P20807 821 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 TACR1P25103 407 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 AHRP35869 848 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 RAE1P78406 368 aaKnown RBP29.14■■■□□ 2.26
CCM2-219ENST00000544363 VPS26BQ4G0F5 336 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 DEPDC1Q5TB30 811 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 REP15Q6BDI9 236 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 ARMC6Q6NXE6 501 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 GALNT18Q6P9A2 607 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 KLHL35Q6PF15 583 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 RSC1A1Q92681 617 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 EBPLQ9BY08 206 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 ANKMY1Q9P2S6 941 aa29.14■■■□□ 2.26
CCM2-219ENST00000544363 KLK4Q9Y5K2 254 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms