RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 PPP1R21Q6ZMI0 780 aa14.57□□□□□ -0.08
CD4-212ENST00000544344 VN1R4Q7Z5H5 301 aa14.57□□□□□ -0.08
CD4-212ENST00000544344 LRRC6Q86X45 466 aa14.57□□□□□ -0.08
CD4-212ENST00000544344 PPFIBP2Q8ND30 876 aa14.57□□□□□ -0.08
CD4-212ENST00000544344 OR51Q1Q8NH59 317 aa14.57□□□□□ -0.08
CD4-212ENST00000544344 PKP4Q99569 1192 aa14.57□□□□□ -0.08
CD4-212ENST00000544344 C19orf25Q9UFG5 118 aaPredicted RBP14.57□□□□□ -0.08
CD4-212ENST00000544344 GRID2IPA4D2P6 1211 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 GOLGA6L9A6NEM1 432 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 E7ENX8 843 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 PRRG2O14669 202 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 NME2P1O60361 137 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 NIPSNAP2O75323 286 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 NADKO95544 446 aaPredicted RBP14.56□□□□□ -0.08
CD4-212ENST00000544344 NME2P22392 152 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 ARNTP27540 789 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 PTGER1P34995 402 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 XCR1P46094 333 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 PNLIPRP1P54315 467 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 TAP2Q03519 686 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 PTK6Q13882 451 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 EXT1Q16394 746 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 PCGF5Q86SE9 256 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 PRUNE1Q86TP1 453 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 LRRC56Q8IYG6 542 aaPredicted RBP14.56□□□□□ -0.08
CD4-212ENST00000544344 MPP5Q8N3R9 675 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 CPSF7Q8N684 471 aaKnown RBP14.56□□□□□ -0.08
CD4-212ENST00000544344 ZNF480Q8WV37 535 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 ATG4AQ8WYN0 398 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 NRGNQ92686 78 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 FAM136AQ96C01 138 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 OLFM1Q99784 485 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 HCN3Q9P1Z3 774 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 LRFN1Q9P244 771 aa14.56□□□□□ -0.08
CD4-212ENST00000544344 NDUFS3O75489 264 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 SLC16A8O95907 504 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 CD99P14209 185 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 ZNF24P17028 368 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 DNAJA1P31689 397 aaKnown RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 FDFT1P37268 417 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 BCL6P41182 706 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 AGTR2P50052 363 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 CRADDP78560 199 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 RHAGQ02094 409 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 OC90Q02509 493 aaPredicted RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 TSTA3Q13630 321 aaPredicted RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 SPA17Q15506 151 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 OASLQ15646 514 aaKnown RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 NDUFA9Q16795 377 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 SFT2D3Q587I9 215 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 ACSBG2Q5FVE4 666 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 MFSD4BQ5TF39 518 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 TMEM214Q6NUQ4 689 aaKnown RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 PAPD4Q6PIY7 484 aaKnown RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 SPNS2Q8IVW8 549 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 CCDC170Q8IYT3 715 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 LGI4Q8N135 537 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 PPHLN1Q8NEY8 458 aaKnown RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 LPGAT1Q92604 370 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 CALR3Q96L12 384 aaKnown RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 MACROD1Q9BQ69 325 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 TRIM45Q9H8W5 580 aaPredicted RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 UTP6Q9NYH9 597 aaKnown RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 COQ3Q9NZJ6 369 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 REXO2Q9Y3B8 237 aaKnown RBP14.55□□□□□ -0.08
CD4-212ENST00000544344 AKAP6Q13023 2319 aa14.55□□□□□ -0.08
CD4-212ENST00000544344 FAM221AA4D161 298 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 NKX2-6A6NCS4 301 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 BTNL10A8MVZ5 291 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 H7BY64 318 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 SGK494L7N484 410 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 SLC25A12O75746 678 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 TOXO94900 526 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 CCNDBP1O95273 360 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 ETS1P14921 441 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 IL1RNP18510 177 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 NMBRP28336 390 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 FMO4P31512 558 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 IST1P53990 364 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 ABATP80404 500 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 KCNJ11Q14654 390 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 USP10Q14694 798 aaKnown RBP14.54□□□□□ -0.08
CD4-212ENST00000544344 MAPKAPK3Q16644 382 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 KLHL38Q2WGJ6 581 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 PCID2Q5JVF3 399 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 PDSS2Q86YH6 399 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 DMRTC2Q8IXT2 367 aaPredicted RBP14.54□□□□□ -0.08
CD4-212ENST00000544344 MMP21Q8N119 569 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 KIF2BQ8N4N8 673 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 SLC5A8Q8N695 610 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 HORMAD2Q8N7B1 307 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 FAM98AQ8NCA5 519 aaKnown RBP14.54□□□□□ -0.08
CD4-212ENST00000544344 PLPP5Q8NEB5 264 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 LILRB4Q8NHJ6 448 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 FAM57AQ8TBR7 257 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 ELP5Q8TE02 316 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 CCDC138Q96M89 665 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 PRAP1Q96NZ9 151 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 UCK2Q9BZX2 261 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 LACRTQ9GZZ8 138 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms