RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 THAP11Q96EK4 314 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 WDR34Q96EX3 536 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 APOPT1Q96IL0 206 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 C10orf90Q96M02 699 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 GBP5Q96PP8 586 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 MACROD1Q9BQ69 325 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 AIF1LQ9BQI0 150 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 EHD1Q9H4M9 534 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 LHX9Q9NQ69 397 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 CUTCQ9NTM9 273 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 TXLNGQ9NUQ3 528 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 PCTPQ9UKL6 214 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 RUVBL1Q9Y265 456 aaKnown RBP14.4□□□□□ -0.1
CD9-210ENST00000543916 TNPO3Q9Y5L0 923 aaKnown RBP14.4□□□□□ -0.1
CD9-210ENST00000543916 APC2O95996 2303 aa14.4□□□□□ -0.11
CD9-210ENST00000543916 HYKKA2RU49 373 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 TERTO14746 1132 aaKnown RBP14.39□□□□□ -0.11
CD9-210ENST00000543916 DSCR3O14972 297 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 PLIN3O60664 434 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 RPS17P08708 135 aaKnown RBP14.39□□□□□ -0.11
CD9-210ENST00000543916 CREB1P16220 341 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 EPB42P16452 691 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 TAC1P20366 129 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 ITGAXP20702 1163 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 SCTRP47872 440 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 CCT5P48643 541 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 ARSFP54793 590 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 NFKB2Q00653 900 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 CHIT1Q13231 466 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 GTF2H2Q13888 395 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 E2F2Q14209 437 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 XKR6Q5GH73 641 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 GTF2H2CQ6P1K8 395 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 METTL2BQ6P1Q9 378 aaKnown RBP14.39□□□□□ -0.11
CD9-210ENST00000543916 ZNF517Q6ZMY9 492 aaPredicted RBP14.39□□□□□ -0.11
CD9-210ENST00000543916 LRRC69Q6ZNQ3 347 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 TTLL10Q6ZVT0 673 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 RPS27LQ71UM5 84 aaKnown RBP14.39□□□□□ -0.11
CD9-210ENST00000543916 ASPGQ86U10 573 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 CT55Q8WUE5 264 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 MR1Q95460 341 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 MOCOSQ96EN8 888 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 PTCD3Q96EY7 689 aaKnown RBP14.39□□□□□ -0.11
CD9-210ENST00000543916 NSUN5Q96P11 429 aaKnown RBP14.39□□□□□ -0.11
CD9-210ENST00000543916 RUFY1Q96T51 708 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 CHST8Q9H2A9 424 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 CROTQ9UKG9 612 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 PADI1Q9ULC6 663 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 GRID1Q9ULK0 1009 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 MRPS2Q9Y399 296 aaKnown RBP14.39□□□□□ -0.11
CD9-210ENST00000543916 ANGPTL3Q9Y5C1 460 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 ACACBO00763 2458 aa14.39□□□□□ -0.11
CD9-210ENST00000543916 MAP1BP46821 2468 aaKnown RBP14.39□□□□□ -0.11
CD9-210ENST00000543916 CELSR3Q9NYQ7 3312 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 USP24Q9UPU5 2620 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 A0A1B0GX78 115 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 G3V2L1 256 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 RGS16O15492 202 aaPredicted RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 EFSO43281 561 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 H2AFYO75367 372 aaKnown RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 SPAG7O75391 227 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 CCNYL3P0C7X3 344 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 LIFP15018 202 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 H2AFXP16104 143 aaPredicted RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 WT1P19544 449 aaPredicted RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 ALAS2P22557 587 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 F8A1P23610 371 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 ATP5F1P24539 256 aaPredicted RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 CASP2P42575 452 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 IRF8Q02556 426 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 PCDH1Q08174 1060 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 CASP8Q14790 479 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 RBBP5Q15291 538 aaKnown RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 CCDC153Q494R4 210 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 MANEAQ5SRI9 462 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 YOD1Q5VVQ6 348 aaPredicted RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 FAM198BQ6UWH4 519 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.38□□□□□ -0.11
CD9-210ENST00000543916 TBC1D19Q8N5T2 526 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 METTL27Q8N6F8 245 aaPredicted RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 PROKR1Q8TCW9 393 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 ZNF483Q8TF39 744 aaPredicted RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 SLC13A3Q8WWT9 602 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 TMEM237Q96Q45 408 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 CCNL2Q96S94 520 aaPredicted RBP14.38□□□□□ -0.11
CD9-210ENST00000543916 ZBTB26Q9HCK0 441 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 ACSS2Q9NR19 701 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 COPG2Q9UBF2 871 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 NDOR1Q9UHB4 597 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 ZFP69BQ9UJL9 534 aa14.38□□□□□ -0.11
CD9-210ENST00000543916 ANKRD11Q6UB99 2663 aaPredicted RBP14.37□□□□□ -0.11
CD9-210ENST00000543916 TXNDC9O14530 226 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 OR7A17O14581 309 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 NDUFS4O43181 175 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 WFS1O76024 890 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 KLK3P07288 261 aaPredicted RBP14.37□□□□□ -0.11
CD9-210ENST00000543916 CAPN1P07384 714 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 TCN2P20062 427 aa14.37□□□□□ -0.11
CD9-210ENST00000543916 AHRP35869 848 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms