RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 IL17BQ9UHF5 180 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 GPN3Q9UHW5 284 aaPredicted RBP17.06■□□□□ 0.32
TSFM-208ENST00000543727 RUVBL1Q9Y265 456 aaKnown RBP17.06■□□□□ 0.32
TSFM-208ENST00000543727 ITPR1Q14643 2758 aa17.06■□□□□ 0.32
TSFM-208ENST00000543727 K7EPI3 171 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 UBXN8O00124 270 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 MAP2K7O14733 419 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 H2AFYO75367 372 aaKnown RBP17.05■□□□□ 0.32
TSFM-208ENST00000543727 CREG1O75629 220 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 CAPN1P07384 714 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 CTSBP07858 339 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 C1GALT1C1LP0DN25 315 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 GFAPP14136 432 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 ALAS2P22557 587 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 F8A1P23610 371 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 HPDP32754 393 aaPredicted RBP17.05■□□□□ 0.32
TSFM-208ENST00000543727 GLRBP48167 497 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 HSPA7P48741 367 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 SKP1P63208 163 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 CDC20Q12834 499 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 SRSF6Q13247 344 aaKnown RBP17.05■□□□□ 0.32
TSFM-208ENST00000543727 LAPTM5Q13571 262 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 NAA30Q147X3 362 aaPredicted RBP17.05■□□□□ 0.32
TSFM-208ENST00000543727 SLCO4C1Q6ZQN7 724 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 VN1R4Q7Z5H5 301 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 ASPGQ86U10 573 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 KRT78Q8N1N4 520 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 ARHGEF39Q8N4T4 335 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 TRPV3Q8NET8 790 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 EXT2Q93063 718 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 TM4SF19Q96DZ7 209 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 C10orf90Q96M02 699 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 EFCAB11Q9BUY7 163 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 PARD6BQ9BYG5 372 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 DRC3Q9H069 523 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 SLC26A1Q9H2B4 701 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 MRPL46Q9H2W6 279 aaKnown RBP17.05■□□□□ 0.32
TSFM-208ENST00000543727 NT5DC2Q9H857 520 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 IFT80Q9P2H3 777 aaPredicted RBP17.05■□□□□ 0.32
TSFM-208ENST00000543727 OPTCQ9UBM4 332 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 ZFP69BQ9UJL9 534 aa17.05■□□□□ 0.32
TSFM-208ENST00000543727 NXT1Q9UKK6 140 aaKnown RBP17.05■□□□□ 0.32
TSFM-208ENST00000543727 CCDC88CQ9P219 2028 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 OR1F1O43749 312 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 KATNA1O75449 491 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 SHBGP04278 402 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 WT1P19544 449 aaPredicted RBP17.04■□□□□ 0.32
TSFM-208ENST00000543727 GMPRP36959 345 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 BCL6P41182 706 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 GDF5P43026 501 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 SCTRP47872 440 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 E2F2Q14209 437 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 TBCCQ15814 346 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 PAGE2BQ5JRK9 111 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 CATSPEREQ5SY80 951 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 FAM199XQ6PEV8 388 aaPredicted RBP17.04■□□□□ 0.32
TSFM-208ENST00000543727 PLD6Q8N2A8 252 aaKnown RBP17.04■□□□□ 0.32
TSFM-208ENST00000543727 ENDOVQ8N8Q3 282 aaKnown RBP17.04■□□□□ 0.32
TSFM-208ENST00000543727 MZB1Q8WU39 189 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 NACC2Q96BF6 587 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 PTCD3Q96EY7 689 aaKnown RBP17.04■□□□□ 0.32
TSFM-208ENST00000543727 WBP1Q96G27 269 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 AKIRIN1Q9H9L7 192 aaPredicted RBP17.04■□□□□ 0.32
TSFM-208ENST00000543727 STARD5Q9NSY2 213 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 XPR1Q9UBH6 696 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.04■□□□□ 0.32
TSFM-208ENST00000543727 TCFL5Q9UL49 500 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 SLC22A7Q9Y694 548 aa17.04■□□□□ 0.32
TSFM-208ENST00000543727 V9GYY5 206 aaPredicted RBP17.04■□□□□ 0.32
TSFM-208ENST00000543727 FEZF1A0PJY2 475 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 URADA6NGE7 173 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 STX16-NPEPL1H3BU86 382 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 ERVH48-1M5A8F1 160 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 STX16O14662 325 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 CCNT2O60583 730 aaKnown RBP17.03■□□□□ 0.32
TSFM-208ENST00000543727 SMIM24O75264 130 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 CASP2P42575 452 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 RGS1Q08116 209 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 DSG2Q14126 1118 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 PCBP2Q15366 365 aaKnown RBP eCLIP17.03■□□□□ 0.322e-11■■■■□ 21.7
TSFM-208ENST00000543727 PFKFB4Q16877 469 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 UGT8Q16880 541 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 HKDC1Q2TB90 917 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 C1orf189Q5VU69 101 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 TMEM214Q6NUQ4 689 aaKnown RBP17.03■□□□□ 0.32
TSFM-208ENST00000543727 MRPL14Q6P1L8 145 aaKnown RBP17.03■□□□□ 0.32
TSFM-208ENST00000543727 OVCH1Q7RTY7 1134 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 PLD3Q8IV08 490 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 SNX31Q8N9S9 440 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 LSM14AQ8ND56 463 aaKnown RBP17.03■□□□□ 0.32
TSFM-208ENST00000543727 NT5CQ8TCD5 201 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 SLC13A3Q8WWT9 602 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 THAP4Q8WY91 577 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 UBE2E3Q969T4 207 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 SCYL1Q96KG9 808 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 IP6K3Q96PC2 410 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 ROPN1BQ9BZX4 212 aaPredicted RBP17.03■□□□□ 0.32
TSFM-208ENST00000543727 ROPN1Q9HAT0 212 aaPredicted RBP17.03■□□□□ 0.32
TSFM-208ENST00000543727 ZNF304Q9HCX3 659 aa17.03■□□□□ 0.32
TSFM-208ENST00000543727 DCDC2Q9UHG0 476 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms