RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CAMK2AQ9UQM7 478 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 CHMP2BQ9UQN3 213 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 B3GALT1Q9Y5Z6 326 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 CSNK1G3Q9Y6M4 447 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 FAM169AQ9Y6X4 670 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ZFYVE26Q68DK2 2539 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 DOCK9Q9BZ29 2069 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 LRRK1Q38SD2 2015 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 DMXL1Q9Y485 3027 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 TRBV5-4A0A0C4DH59 114 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ZCWPW2A0A1B0GU75 182 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 OR2AG2A6NM03 316 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 GOLGA8KD6RF30 607 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 GOLGA8TH3BQL2 631 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 CHUKO15111 745 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 FLRT2O43155 660 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 KERAO60938 352 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 NDUFS3O75489 264 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 TPPPO94811 219 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 MT-ND5P03915 603 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 FUCA1P04066 466 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 TK1P04183 234 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ITGA2BP08514 1039 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 CCDC159P0C7I6 412 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 PRSS56P0CW18 603 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ATP1B2P14415 290 aaPredicted RBP4.97□□□□□ -1.61
CLIP1-217ENST00000543205 VCLP18206 1134 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 GABRB3P28472 473 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 CA5AP35218 305 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 GGT5P36269 586 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 NSG1P42857 185 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ARCN1P48444 511 aaKnown RBP4.97□□□□□ -1.61
CLIP1-217ENST00000543205 TTPAP49638 278 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ARFIP1P53367 373 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 CUL1Q13616 776 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 CRYMQ14894 314 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 INSCQ1MX18 579 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 DEFB133Q30KQ1 61 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 KHDC1Q4VXA5 237 aaKnown RBP4.97□□□□□ -1.61
CLIP1-217ENST00000543205 KCTD16Q68DU8 428 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 NEPROQ6NW34 567 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ZDHHC24Q6UX98 284 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 MICALCLQ6ZW33 695 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 KCNMB4Q86W47 210 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ARMC8Q8IUR7 673 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 IGDCC3Q8IVU1 814 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 NAXDQ8IW45 347 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ZZZ3Q8IYH5 903 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 PIANPQ8IYJ0 282 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 SLC25A45Q8N413 288 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 EID2Q8N6I1 236 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 RASGEF1AQ8N9B8 481 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 GPR150Q8NGU9 434 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 CALML6Q8TD86 181 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 DENND1AQ8TEH3 1009 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 SGF29Q96ES7 293 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 ZNF514Q96K75 400 aaPredicted RBP4.97□□□□□ -1.61
CLIP1-217ENST00000543205 CNDP1Q96KN2 507 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 FCRL3Q96P31 734 aaPredicted RBP4.97□□□□□ -1.61
CLIP1-217ENST00000543205 LRRC61Q9BV99 259 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 TSPYL1Q9H0U9 437 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 TMEM168Q9H0V1 697 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 SLC32A1Q9H598 525 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 TRNAU1APQ9NX07 287 aaKnown RBP4.97□□□□□ -1.61
CLIP1-217ENST00000543205 NLGN3Q9NZ94 848 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 TEX264Q9Y6I9 313 aa4.97□□□□□ -1.61
CLIP1-217ENST00000543205 PCDH15Q96QU1 1955 aa4.96□□□□□ -1.61
CLIP1-217ENST00000543205 A0A0U1RQK1 487 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ZNF320A2RRD8 509 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 KRT87PA6NCN2 255 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 E7ESA3 106 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 LMO7DNF2Z398 122 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 H0YAE9 185 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 QSOX1O00391 747 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 YY2O15391 372 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 KCNJ13O60928 360 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 POP7O75817 140 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ACTL6BO94805 426 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 AP2A2O94973 939 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 SNX4O95219 450 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CELA3BP08861 270 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 OR56A5P0C7T3 313 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ERVK-10P10266 1014 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ACP5P13686 325 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CD59P13987 128 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ZNF7P17097 686 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ACTR1BP42025 376 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 MAGEA4P43358 317 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 RAD23AP54725 363 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ACTR1AP61163 376 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 B4GALNT1Q00973 533 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 KCNAB2Q13303 367 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 TMED1Q13445 227 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ITIH4Q14624 930 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ZNF470Q6ECI4 717 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 SLC30A9Q6PML9 568 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PACS1Q6VY07 963 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 DBX2Q6ZNG2 339 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 GLRX5Q86SX6 157 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 LDB1Q86U70 411 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms