RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 ZNF587Q96SQ5 575 aaPredicted RBP4.49□□□□□ -1.69
LIMS1-214ENST00000542845 PLCD4Q9BRC7 762 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 TTYH2Q9BSA4 534 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 MENTQ9BUN1 341 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 CHRNA10Q9GZZ6 450 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 OR52A5Q9H2C5 316 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 COG4Q9H9E3 785 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 PCDH18Q9HCL0 1135 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 SSU72Q9NP77 194 aaKnown RBP4.49□□□□□ -1.69
LIMS1-214ENST00000542845 YAE1D1Q9NRH1 226 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 DDX56Q9NY93 547 aaKnown RBP4.49□□□□□ -1.69
LIMS1-214ENST00000542845 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.49□□□□□ -1.69
LIMS1-214ENST00000542845 NFKBIL1Q9UBC1 381 aaPredicted RBP4.49□□□□□ -1.69
LIMS1-214ENST00000542845 AMACRQ9UHK6 382 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 CRLS1Q9UJA2 301 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 GDF2Q9UK05 429 aaPredicted RBP4.49□□□□□ -1.69
LIMS1-214ENST00000542845 PKP3Q9Y446 797 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 CUBNO60494 3623 aa4.49□□□□□ -1.69
LIMS1-214ENST00000542845 A0A0A6YYC8 382 aaPredicted RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 KLHL33A6NCF5 533 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 TUBAL3A6NHL2 446 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 CLCA1A8K7I4 914 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 FAM166BA8MTA8 275 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 KLRC4-KLRK1H3BQV0 150 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 I3L1I5 382 aaPredicted RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 SYT5O00445 386 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 CLDN4O14493 209 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 SPRY1O43609 319 aaPredicted RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 SGTAO43765 313 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 PEX1O43933 1283 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 NME2P1O60361 137 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 NEURL1O76050 574 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 CNOT4O95628 575 aaKnown RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 NDST3O95803 873 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 STATHP02808 62 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 TPBGLP0DKB5 382 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 EPXP11678 715 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 ATP1B2P14415 290 aaPredicted RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 BMP5P22003 454 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 CHRNA4P43681 627 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 CD151P48509 253 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 ITGA8P53708 1063 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 NR1H2P55055 460 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 MAT1AQ00266 395 aaKnown RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 PLGLB1Q02325 96 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 ID3Q02535 119 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 KIR2DS3Q14952 304 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 DAZAP2Q15038 168 aaPredicted RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 MUM1Q2TAK8 710 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 SLC25A35Q3KQZ1 300 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 BCL7AQ4VC05 210 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 CCDC38Q502W7 563 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 FIGNQ5HY92 759 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 ZDHHC20Q5W0Z9 365 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 KAZNQ674X7 775 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 NCBP2-AS2Q69YL0 99 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 H3F3CQ6NXT2 135 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 PRMT9Q6P2P2 845 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 ARHGAP11AQ6P4F7 1023 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 PAOXQ6QHF9 649 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 SLCO4C1Q6ZQN7 724 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 CXorf67Q86X51 503 aaPredicted RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 KCTD6Q8NC69 237 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 WDR89Q96FK6 387 aaPredicted RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 IMP4Q96G21 291 aaKnown RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 BTBD6Q96KE9 485 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 DHRS1Q96LJ7 313 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 LINC00615Q96LM1 132 aaPredicted RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 TIGD1Q96MW7 591 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 IL17FQ96PD4 163 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 TSGA13Q96PP4 275 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 CYTH2Q99418 400 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 NPAS2Q99743 824 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 OLFM1Q99784 485 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 MIPEPQ99797 713 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 ZFYVE21Q9BQ24 234 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 THAP2Q9H0W7 228 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 GANQ9H2C0 597 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 INTS7Q9NVH2 962 aaKnown RBP4.48□□□□□ -1.69
LIMS1-214ENST00000542845 OR6C2Q9NZP2 312 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 POLG2Q9UHN1 485 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 ADAM30Q9UKF2 790 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 ACAD8Q9UKU7 415 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 CDC14AQ9UNH5 594 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 HIF3AQ9Y2N7 669 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 ZDHHC9Q9Y397 364 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 HEY1Q9Y5J3 304 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 DUSP10Q9Y6W6 482 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 HIVEP2P31629 2446 aa4.48□□□□□ -1.69
LIMS1-214ENST00000542845 HRNRQ86YZ3 2850 aaPredicted RBP4.47□□□□□ -1.69
LIMS1-214ENST00000542845 STAB1Q9NY15 2570 aa4.47□□□□□ -1.69
LIMS1-214ENST00000542845 SCN3AQ9NY46 2000 aa4.47□□□□□ -1.69
LIMS1-214ENST00000542845 A0A087X1B8 175 aa4.47□□□□□ -1.69
LIMS1-214ENST00000542845 LOC102723996A0A087X1L8 192 aa4.47□□□□□ -1.69
LIMS1-214ENST00000542845 TRAV20A0A0B4J274 112 aa4.47□□□□□ -1.69
LIMS1-214ENST00000542845 LOC100289279A0A1B0GTE1 492 aa4.47□□□□□ -1.69
LIMS1-214ENST00000542845 FITM1A5D6W6 292 aa4.47□□□□□ -1.69
LIMS1-214ENST00000542845 MBD3L4A6NDZ8 208 aaPredicted RBP4.47□□□□□ -1.69
LIMS1-214ENST00000542845 MBD3L5A6NJ08 208 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms