RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 AASDHPPTQ9NRN7 309 aa9.53□□□□□ -0.88
SS18-205ENST00000542420 FAIMQ9NVQ4 179 aa9.53□□□□□ -0.88
SS18-205ENST00000542420 CXXC1Q9P0U4 656 aaPredicted RBP9.53□□□□□ -0.88
SS18-205ENST00000542420 ORC6Q9Y5N6 252 aa9.53□□□□□ -0.88
SS18-205ENST00000542420 HTR3EA5X5Y0 456 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 MGAT4DA6NG13 374 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 KPNA3O00505 521 aaPredicted RBP9.52□□□□□ -0.89
SS18-205ENST00000542420 SERPINA1P01009 418 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 ACADLP28330 430 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 PCGF2P35227 344 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 NEK2P51955 445 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 ARHGDIAP52565 204 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 NUP107P57740 925 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 PDE7AQ13946 482 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 PGS1Q32NB8 556 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 FNDC3BQ53EP0 1204 aaKnown RBP9.52□□□□□ -0.89
SS18-205ENST00000542420 SLC44A4Q53GD3 710 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 PYCR3Q53H96 274 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 OR4F3Q6IEY1 312 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 ENPP6Q6UWR7 440 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 STK32CQ86UX6 486 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 SYNPOQ8N3V7 929 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 NAT16Q8N8M0 369 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 SETD9Q8NE22 299 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 FBXO30Q8TB52 745 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 SMG7Q92540 1137 aaKnown RBP9.52□□□□□ -0.89
SS18-205ENST00000542420 NCLNQ969V3 563 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 ARRDC3Q96B67 414 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 PYCR2Q96C36 320 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 ASB16Q96NS5 453 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 OR4K3Q96R72 315 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 PANX1Q96RD7 426 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 CDCA3Q99618 268 aaPredicted RBP9.52□□□□□ -0.89
SS18-205ENST00000542420 BCL7BQ9BQE9 202 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 INPP5KQ9BT40 448 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 CHST8Q9H2A9 424 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 PELI2Q9HAT8 420 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 MYNNQ9NPC7 610 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 VPS4AQ9UN37 437 aa9.52□□□□□ -0.89
SS18-205ENST00000542420 C1orf226A1L170 272 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 GNGT2O14610 69 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 KCNJ13O60928 360 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 UGT2B11O75310 529 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 MTX2O75431 263 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 TRMUO75648 421 aaKnown RBP9.51□□□□□ -0.89
SS18-205ENST00000542420 SEMA3DO95025 777 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 KCNK5O95279 499 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 SNAP29O95721 258 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 SLC16A8O95907 504 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 KELP23276 732 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 DCKP27707 260 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 DCTP40126 519 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 GPR1P46091 355 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CXCR4P61073 352 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 RAE1P78406 368 aaKnown RBP9.51□□□□□ -0.89
SS18-205ENST00000542420 NTHL1P78549 312 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 ZNF763Q0D2J5 394 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 FADDQ13158 208 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 KEAP1Q14145 624 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
SS18-205ENST00000542420 AAK1Q2M2I8 961 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 LRRC73Q5JTD7 316 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CPTPQ5TA50 214 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 BROXQ5VW32 411 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 TMEM214Q6NUQ4 689 aaKnown RBP9.51□□□□□ -0.89
SS18-205ENST00000542420 KLHL35Q6PF15 583 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 DOK6Q6PKX4 331 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 TBPL2Q6SJ96 375 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 ZC3H7AQ8IWR0 971 aaKnown RBP9.51□□□□□ -0.89
SS18-205ENST00000542420 NPAS3Q8IXF0 933 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 VN1R2Q8NFZ6 395 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.51□□□□□ -0.892e-14■■□□□ 11.4
SS18-205ENST00000542420 FNDC8Q8TC99 324 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 ZNF480Q8WV37 535 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 ABHD8Q96I13 439 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 DHRS1Q96LJ7 313 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 NPLQ9BXD5 320 aaPredicted RBP9.51□□□□□ -0.89
SS18-205ENST00000542420 ASPSCR1Q9BZE9 553 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CARS2Q9HA77 564 aaKnown RBP9.51□□□□□ -0.89
SS18-205ENST00000542420 FAM118AQ9NWS6 357 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 HCFC2Q9Y5Z7 792 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 TMEM202A6NGA9 273 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 A8MVJ9 347 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 SERPINB7O75635 380 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 GNAO1P09471 354 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CCDC159P0C7I6 412 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 C6P13671 934 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 ENGP17813 658 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 NAT1P18440 290 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 FPR1P21462 350 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 IDSP22304 550 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CXCR2P25025 360 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 KDELR2P33947 212 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 BDKRB1P46663 353 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 TBPL1P62380 186 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CTBSQ01459 385 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 FCHO2Q0JRZ9 810 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 GRIN2CQ14957 1233 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 NKG7Q16617 165 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CLPPQ16740 277 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms